RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 CLN3Q13286 438 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 LBRQ14739 615 aaKnown RBP12.25□□□□□ -0.45
SNHG4-208ENST00000514110 ACOX1Q15067 660 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 TAF8Q7Z7C8 310 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 PSTKQ8IV42 348 aaKnown RBP12.25□□□□□ -0.45
SNHG4-208ENST00000514110 FBXO39Q8N4B4 442 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 PAF1Q8N7H5 531 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 FAM46DQ8NEK8 389 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 CCL4L1Q8NHW4 92 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 TTC9Q92623 222 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 ZNF653Q96CK0 615 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 CCDC97Q96F63 343 aaPredicted RBP12.25□□□□□ -0.45
SNHG4-208ENST00000514110 NAP1L5Q96NT1 182 aaPredicted RBP12.25□□□□□ -0.45
SNHG4-208ENST00000514110 PSKH2Q96QS6 385 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 SEMA4CQ9C0C4 833 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 TMEM168Q9H0V1 697 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 LRRN3Q9H3W5 708 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 ETNK2Q9NVF9 386 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 AIPL1Q9NZN9 384 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 TMEM63CQ9P1W3 806 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 MYO1AQ9UBC5 1043 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 B4GALT6Q9UBX8 382 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 SEPT3Q9UH03 358 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 PCDHGC4Q9Y5F7 938 aa12.25□□□□□ -0.45
SNHG4-208ENST00000514110 GOLGA6L22H0YM25 854 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 K7ENP7 123 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 TNFRSF10CO14798 259 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 PEX11BO96011 259 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 SKILP12757 684 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 HGFP14210 728 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 PLA2G2AP14555 144 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 CR2P20023 1033 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 AMPD1P23109 780 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 SLC5A2P31639 672 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 UGT1A5P35504 534 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 MLLT3P42568 568 aaPredicted RBP12.24□□□□□ -0.45
SNHG4-208ENST00000514110 RENBPP51606 427 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 ZNF135P52742 658 aaPredicted RBP12.24□□□□□ -0.45
SNHG4-208ENST00000514110 INHBCP55103 352 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 POLR2LP62875 67 aaKnown RBP12.24□□□□□ -0.45
SNHG4-208ENST00000514110 KLHL30Q0D2K2 578 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 SMTNL2Q2TAL5 461 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 TMCO4Q5TGY1 634 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 PNCKQ6P2M8 343 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 INO80CQ6PI98 192 aaPredicted RBP12.24□□□□□ -0.45
SNHG4-208ENST00000514110 OGFOD3Q6PK18 319 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 RAB11FIP2Q7L804 512 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 CCNJLQ8IV13 435 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 PGBD5Q8N414 524 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 LZTR1Q8N653 840 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 Q8N9G6 341 aaPredicted RBP12.24□□□□□ -0.45
SNHG4-208ENST00000514110 OR6C4Q8NGE1 309 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 WBP1Q96G27 269 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 COQ10AQ96MF6 247 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 ZNF599Q96NL3 588 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 BPIFA3Q9BQP9 254 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 NAT10Q9H0A0 1025 aaKnown RBP12.24□□□□□ -0.45
SNHG4-208ENST00000514110 WDR26Q9H7D7 661 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 ZWILCHQ9H900 591 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 CYP4F12Q9HCS2 524 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 MOSPD1Q9UJG1 213 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 ATXN7L1Q9ULK2 861 aaPredicted RBP12.24□□□□□ -0.45
SNHG4-208ENST00000514110 SCINQ9Y6U3 715 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 RNF215Q9Y6U7 377 aa12.24□□□□□ -0.45
SNHG4-208ENST00000514110 A0A1B0GTH6 734 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.23□□□□□ -0.45
SNHG4-208ENST00000514110 PRSS38A1L453 326 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 B4DGG1 531 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 H3BRJ5 948 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 AGRPO00253 132 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 HTRA2O43464 458 aaPredicted RBP12.23□□□□□ -0.45
SNHG4-208ENST00000514110 MBD3O95983 291 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 FUCA1P04066 466 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 GLB1P16278 677 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 CCKBRP32239 447 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 PCK1P35558 622 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 EIF3IQ13347 325 aaKnown RBP12.23□□□□□ -0.45
SNHG4-208ENST00000514110 LY6DQ14210 128 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 HLTFQ14527 1009 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNHG4-208ENST00000514110 ZNF235Q14590 738 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 PTPRRQ15256 657 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 CNGA3Q16281 694 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 DPYSL2Q16555 572 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 ZSCAN23Q3MJ62 389 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 C14orf28Q4W4Y0 310 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 CERCAMQ5T4B2 595 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 KIAA1614Q5VZ46 1190 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 TXNRD3NBQ6F5E7 133 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 POLNQ7Z5Q5 900 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 ZNF605Q86T29 641 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 CBARPQ8N350 705 aaPredicted RBP12.23□□□□□ -0.45
SNHG4-208ENST00000514110 PDCD6IPQ8WUM4 868 aaKnown RBP12.23□□□□□ -0.45
SNHG4-208ENST00000514110 SPOCK2Q92563 424 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 HSPH1Q92598 858 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 NUDCD1Q96RS6 583 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 STRADBQ9C0K7 418 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 ISCUQ9H1K1 167 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 NOD2Q9HC29 1040 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 APPL1Q9UKG1 709 aa12.23□□□□□ -0.45
SNHG4-208ENST00000514110 HELZ2Q9BYK8 2649 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms