RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 CLDN2P57739 230 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 ELP6Q0PNE2 266 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 MPP3Q13368 585 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 MTM1Q13496 603 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 PARP6Q2NL67 630 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 TMEM52BQ4KMG9 183 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 TCEAL6Q6IPX3 200 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 CRTC1Q6UUV9 634 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 USP45Q70EL2 814 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 ASCL5Q7RTU5 278 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 LYSMD3Q7Z3D4 306 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 HSD11B1LQ7Z5J1 315 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 C11orf74Q86VG3 221 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 TRIM69Q86WT6 500 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 DCLK2Q8N568 766 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 CADM4Q8NFZ8 388 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 TCEAL3Q969E4 200 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 MARVELD3Q96A59 401 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 RAB7BQ96AH8 199 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 FEM1CQ96JP0 617 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 ZC3H10Q96K80 434 aaKnown RBP9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 MCCC1Q96RQ3 725 aaPredicted RBP9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 TBL1YQ9BQ87 522 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 CAAP1Q9H8G2 361 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 HOMER3Q9NSC5 361 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 PAK5Q9P286 719 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 CD84Q9UIB8 345 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 DRG1Q9Y295 367 aaKnown RBP9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 ZNF711Q9Y462 761 aa9.83□□□□□ -0.84
TOPBP1-209ENST00000513818 TRPM6Q9BX84 2022 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 C1orf232A0A0U1RR37 186 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 LOC285095A0A1B0GVY8 99 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 CCDC78A2IDD5 438 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 ANKRD66B4E2M5 251 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 C10orf142B7Z368 130 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 E7EVH7 732 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 H0Y8X5 98 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 TTI1O43156 1089 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 TSPAN6O43657 245 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 BUD23O43709 281 aaKnown RBP9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 LZTS3O60299 673 aaPredicted RBP9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 ANXA9O76027 345 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 HEXIM1O94992 359 aaKnown RBP9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 CLDN7O95471 211 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 ECEL1O95672 775 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 PAK4O96013 591 aaPredicted RBP9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 LMNAP02545 664 aaKnown RBP9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 PCCBP05166 539 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 APRTP07741 180 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 CYP2A6P11509 494 aaPredicted RBP9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 STIP1P31948 543 aaKnown RBP9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 ADRA1AP35348 466 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 ACTN2P35609 894 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 IGFALSP35858 605 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 ETV3P41162 512 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 PTGIRP43119 386 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 LMAN1P49257 510 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 POLR2LP62875 67 aaKnown RBP9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 RPS21P63220 83 aaKnown RBP9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 CCDC15Q0P6D6 951 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 GPS1Q13098 491 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 ACOX1Q15067 660 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 PPP1R7Q15435 360 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 SLC1A5Q15758 541 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 SLC14A2Q15849 920 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 ANKRD22Q5VYY1 191 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 KCTD11Q693B1 232 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 LAIR1Q6GTX8 287 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 KIAA1161Q6NSJ0 714 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 LIPIQ6XZB0 460 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 KLHDC8BQ8IXV7 354 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 PELI3Q8N2H9 469 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 SPATA4Q8NEY3 305 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 OR52K1Q8NGK4 314 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 ATL2Q8NHH9 583 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 BLOC1S5Q8TDH9 187 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 HCAR2Q8TDS4 363 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 FOXJ1Q92949 421 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 SCRN2Q96FV2 425 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 SERAC1Q96JX3 654 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 HINFPQ9BQA5 517 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 ADGRE3Q9BY15 652 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 IRF2BPLQ9H1B7 796 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 TM9SF3Q9HD45 589 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 AASDHPPTQ9NRN7 309 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 VPS45Q9NRW7 570 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 NCDNQ9UBB6 729 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 CDC23Q9UJX2 597 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 FNDC3AQ9Y2H6 1198 aaKnown RBP9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 NEU2Q9Y3R4 380 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 MRFAP1Q9Y605 127 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 ADAMTS9Q9P2N4 1935 aa9.82□□□□□ -0.84
TOPBP1-209ENST00000513818 A0A1W2PPC4 97 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 A0A1W2PQ67 120 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 GOLGA6CA6NDK9 693 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 GOLGA6BA6NDN3 693 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 K7ESM1 405 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 KIF2AO00139 706 aaPredicted RBP9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 LATO43561 262 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 ZNF189O75820 626 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms