RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 FNTAP49354 379 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 CARSP49589 748 aaKnown RBP9.96□□□□□ -0.82
CCL28-203ENST00000513525 DRG2P55039 364 aaKnown RBP9.96□□□□□ -0.82
CCL28-203ENST00000513525 MRPS25P82663 173 aaKnown RBP9.96□□□□□ -0.82
CCL28-203ENST00000513525 DR1Q01658 176 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 DNAJC3Q13217 504 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 ILKQ13418 452 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 GLIPR1L2Q4G1C9 344 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 INO80DQ53TQ3 878 aaPredicted RBP9.96□□□□□ -0.82
CCL28-203ENST00000513525 ZNF805Q5CZA5 627 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 LRRC38Q5VT99 294 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 SEL1L3Q68CR1 1132 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 DHRS13Q6UX07 377 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 KYAT3Q6YP21 454 aaKnown RBP9.96□□□□□ -0.82
CCL28-203ENST00000513525 RHOT1Q8IXI2 618 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 GSPT2Q8IYD1 628 aaKnown RBP9.96□□□□□ -0.82
CCL28-203ENST00000513525 SLC22A18ASQ8N1D0 253 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 PYROXD2Q8N2H3 581 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 OR13H1Q8NG92 308 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 ASB12Q8WXK4 309 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 IFT81Q8WYA0 676 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 KLK6Q92876 244 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 FEM1CQ96JP0 617 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 BTBD6Q96KE9 485 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 PKNOX2Q96KN3 472 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 LENG8Q96PV6 779 aaPredicted RBP9.96□□□□□ -0.82
CCL28-203ENST00000513525 MYOCQ99972 504 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 SLC17A9Q9BYT1 436 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 FAM129AQ9BZQ8 928 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 CATSPERBQ9H7T0 1116 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 FZD3Q9NPG1 666 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 KLHL11Q9NVR0 708 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 AMACRQ9UHK6 382 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 NFU1Q9UMS0 254 aa9.96□□□□□ -0.82
CCL28-203ENST00000513525 ZFC3H1O60293 1989 aaKnown RBP9.95□□□□□ -0.82
CCL28-203ENST00000513525 GOLGA6BA6NDN3 693 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 C16orf96A6NNT2 1141 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 H3BQF6 201 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 FGF10O15520 208 aaPredicted RBP9.95□□□□□ -0.82
CCL28-203ENST00000513525 TSPAN6O43657 245 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 TMCC1O94876 653 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 POP4O95707 220 aaKnown RBP9.95□□□□□ -0.82
CCL28-203ENST00000513525 ACP1P24666 158 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 HNF1BP35680 557 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 HSPA9P38646 679 aaKnown RBP9.95□□□□□ -0.82
CCL28-203ENST00000513525 CETN2P41208 172 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 ABL2P42684 1182 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 OGDHQ02218 1023 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 FGL2Q14314 439 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 PIGHQ14442 188 aaPredicted RBP9.95□□□□□ -0.82
CCL28-203ENST00000513525 PARP15Q460N3 678 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 SCYL2Q6P3W7 929 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 DCUN1D2Q6PH85 259 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 KATNAL2Q8IYT4 538 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 UMODL1-AS1Q8N2C9 162 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 NIPA2Q8N8Q9 360 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 PRELID2Q8N945 189 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 DENND6BQ8NEG7 585 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 MDM1Q8TC05 714 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 SLCO2A1Q92959 643 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 LRRC45Q96CN5 670 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 BMFQ96LC9 184 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 GDAP1L1Q96MZ0 367 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 C1QTNF2Q9BXJ5 285 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 LRRC19Q9H756 370 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 HOMER3Q9NSC5 361 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 DONSONQ9NYP3 566 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 MFHAS1Q9Y4C4 1052 aa9.95□□□□□ -0.82
CCL28-203ENST00000513525 ARHGEF17Q96PE2 2063 aaPredicted RBP9.95□□□□□ -0.82
CCL28-203ENST00000513525 KIF26BQ2KJY2 2108 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 TRABD2BA6NFA1 517 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 RASA4BC9J798 803 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 AREL1O15033 823 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 TTI1O43156 1089 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 SPINT1O43278 529 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 RASA4O43374 803 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 CREB3O43889 395 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 OPA1O60313 960 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 SDC3O75056 442 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 PIAS2O75928 621 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 IGSF6O95976 241 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 PAK4O96013 591 aaPredicted RBP9.94□□□□□ -0.82
CCL28-203ENST00000513525 CKMT2P17540 419 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 DGKAP23743 735 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 GKP32189 559 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 RABIFP47224 123 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 CLDN2P57739 230 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 RAD51Q06609 339 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 SERINC3Q13530 473 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 MYLK3Q32MK0 819 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 CCDC157Q569K6 752 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 DUPD1Q68J44 220 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 SYDE1Q6ZW31 735 aaPredicted RBP9.94□□□□□ -0.82
CCL28-203ENST00000513525 JAMLQ86YT9 394 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 CACTIN-AS1Q8N1I8 211 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 SLC25A45Q8N413 288 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 RYBPQ8N488 228 aaPredicted RBP9.94□□□□□ -0.82
CCL28-203ENST00000513525 GOLGA6L1Q8N7Z2 621 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 OR6K2Q8NGY2 324 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 OR4C6Q8NH72 309 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms