RNA–Protein interactions for RNA: ENST00000513440.5

CLOCK-211, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 3,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-211ENST00000513440 DUSP4Q13115 394 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 ARPINQ7Z6K5 226 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 ADGRG6Q86SQ4 1221 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 SATL1Q86VE3 508 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 CPSF7Q8N684 471 aaKnown RBP14.09□□□□□ -0.15
CLOCK-211ENST00000513440 HMGCLL1Q8TB92 370 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 PTCD2Q8WV60 388 aaKnown RBP14.09□□□□□ -0.15
CLOCK-211ENST00000513440 BHMTQ93088 406 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 TRIM4Q9C037 500 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 ZNF385DQ9H6B1 395 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 MID1IP1Q9NPA3 183 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 SCML2Q9UQR0 700 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 MYLKQ15746 1914 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 GLP2RO95838 553 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 TYMPP19971 482 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 LEPRP48357 1165 aaKnown RBP14.09□□□□□ -0.15
CLOCK-211ENST00000513440 SCNN1BP51168 640 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 AFMIDQ63HM1 303 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 AMIGO2Q86SJ2 522 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 SETD3Q86TU7 594 aaPredicted RBP14.09□□□□□ -0.15
CLOCK-211ENST00000513440 ABI1Q8IZP0 508 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 AFAP1L2Q8N4X5 818 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 TRPC4APQ8TEL6 797 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 TSPAN17Q96FV3 270 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 LRCH3Q96II8 777 aa14.09□□□□□ -0.15
CLOCK-211ENST00000513440 RBP1P09455 135 aa14.08□□□□□ -0.15
CLOCK-211ENST00000513440 IRF1P10914 325 aa14.08□□□□□ -0.15
CLOCK-211ENST00000513440 FCGRTP55899 365 aa14.08□□□□□ -0.15
CLOCK-211ENST00000513440 HABP4Q5JVS0 413 aaKnown RBP14.08□□□□□ -0.15
CLOCK-211ENST00000513440 ZNF598Q86UK7 904 aaKnown RBP14.08□□□□□ -0.15
CLOCK-211ENST00000513440 UMODL1-AS1Q8N2C9 162 aa14.08□□□□□ -0.15
CLOCK-211ENST00000513440 EFHBQ8N7U6 833 aa14.08□□□□□ -0.15
CLOCK-211ENST00000513440 ARRDC2Q8TBH0 407 aa14.08□□□□□ -0.15
CLOCK-211ENST00000513440 PPWD1Q96BP3 646 aaKnown RBP14.08□□□□□ -0.15
CLOCK-211ENST00000513440 SLC39A13Q96H72 371 aa14.08□□□□□ -0.15
CLOCK-211ENST00000513440 FBXO44Q9H4M3 255 aa14.08□□□□□ -0.15
CLOCK-211ENST00000513440 BPIFA1Q9NP55 256 aa14.08□□□□□ -0.15
CLOCK-211ENST00000513440 SARS2Q9NP81 518 aaKnown RBP14.08□□□□□ -0.15
CLOCK-211ENST00000513440 PRDM5Q9NQX1 630 aaPredicted RBP14.08□□□□□ -0.15
CLOCK-211ENST00000513440 NYNRINQ9P2P1 1898 aaKnown RBP14.08□□□□□ -0.16
CLOCK-211ENST00000513440 FBP2O00757 339 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 MRASO14807 208 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 CD3EAPO15446 510 aaKnown RBP14.08□□□□□ -0.16
CLOCK-211ENST00000513440 LDB2O43679 373 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 RNASEH2AO75792 299 aaKnown RBP14.08□□□□□ -0.16
CLOCK-211ENST00000513440 CAPN15O75808 1086 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 RPL17P18621 184 aaKnown RBP14.08□□□□□ -0.16
CLOCK-211ENST00000513440 CASP2P42575 452 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 MBTPS1Q14703 1052 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 ZNF549Q6P9A3 640 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 ISCA2Q86U28 154 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 UROC1Q96N76 676 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 GSTO2Q9H4Y5 243 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 SEMA4BQ9NPR2 832 aaPredicted RBP14.08□□□□□ -0.16
CLOCK-211ENST00000513440 ABT1Q9ULW3 272 aaKnown RBP14.08□□□□□ -0.16
CLOCK-211ENST00000513440 SUPT3HB4E1H0 165 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 TPST1O60507 370 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 SUPT3HO75486 399 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 CRTAMO95727 393 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 ATXN1LP0C7T5 689 aaKnown RBP14.08□□□□□ -0.16
CLOCK-211ENST00000513440 ADGRE1Q14246 886 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 FAM110BQ8TC76 370 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 LINC01599Q8WXQ3 324 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 EME1Q96AY2 570 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 MRM3Q9HC36 420 aaKnown RBP14.08□□□□□ -0.16
CLOCK-211ENST00000513440 TMEM248Q9NWD8 314 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 PCDHGA7Q9Y5G6 932 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 SNX13Q9Y5W8 968 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 AP4B1Q9Y6B7 739 aa14.08□□□□□ -0.16
CLOCK-211ENST00000513440 GOLGA8CPA6NN73 597 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 CRCPO75575 148 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 LINC00032P0C843 101 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 CKBP12277 381 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 CHRM3P20309 590 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 CDKN1CP49918 316 aaPredicted RBP14.07□□□□□ -0.16
CLOCK-211ENST00000513440 RPS24P62847 133 aaKnown RBP14.07□□□□□ -0.16
CLOCK-211ENST00000513440 CAPRIN1Q14444 709 aaKnown RBP14.07□□□□□ -0.16
CLOCK-211ENST00000513440 OR4D1Q15615 310 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 NFE2Q16621 373 aaPredicted RBP14.07□□□□□ -0.16
CLOCK-211ENST00000513440 OGFRL1Q5TC84 451 aaPredicted RBP14.07□□□□□ -0.16
CLOCK-211ENST00000513440 RSPO2Q6UXX9 243 aaPredicted RBP14.07□□□□□ -0.16
CLOCK-211ENST00000513440 RNF19BQ6ZMZ0 732 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 LRTOMTQ8WZ04 291 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 BTN2A3PQ96KV6 586 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 CACNA2D2Q9NY47 1150 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 UBAP1Q9NZ09 502 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 TIMM22Q9Y584 194 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 H3BMM5 538 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 TLR5O60602 858 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 RHOBTB1O94844 696 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 GSTT1P30711 240 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 NDST2P52849 883 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 SH3BP2P78314 561 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 ACAP2Q15057 778 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 CYTH1Q15438 398 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 MAP7D1Q3KQU3 841 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 UNC50Q53HI1 259 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 NADSYN1Q6IA69 706 aa14.07□□□□□ -0.16
CLOCK-211ENST00000513440 PRSS55Q6UWB4 352 aaPredicted RBP14.07□□□□□ -0.16
CLOCK-211ENST00000513440 KIAA0408Q6ZU52 694 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms