RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 HS3ST3B1Q9Y662 390 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 ITGB4P16144 1822 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 MAP3K15Q6ZN16 1313 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 COL3A1P02461 1466 aaPredicted RBP4.43□□□□□ -1.7
HTT-210ENST00000512909 FAM157AC9JC47 383 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 ATP2C2O75185 946 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 DDX58O95786 925 aaKnown RBP4.42□□□□□ -1.7
HTT-210ENST00000512909 LATS1O95835 1130 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 F9P00740 461 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 CELA2AP08217 269 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 TMEM191BP0C7N4 346 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 UBL4AP11441 157 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 ENO3P13929 434 aaPredicted RBP4.42□□□□□ -1.7
HTT-210ENST00000512909 CDC25AP30304 524 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 ME3Q16798 604 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 PARP10Q53GL7 1025 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 HSP90AB3PQ58FF7 597 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 SERTAD4-AS1Q5TG53 156 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 HEPHL1Q6MZM0 1159 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 MOB3CQ70IA8 216 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 PKD1L3Q7Z443 1732 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 PIM3Q86V86 326 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 CNTROBQ8N137 903 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 TMEM199Q8N511 208 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 MPLKIPQ8TAP9 179 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 H2AFJQ9BTM1 129 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 PHF7Q9BWX1 381 aaPredicted RBP4.42□□□□□ -1.7
HTT-210ENST00000512909 RANBP17Q9H2T7 1088 aaKnown RBP4.42□□□□□ -1.7
HTT-210ENST00000512909 CXorf56Q9H5V9 222 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 EIF2B3Q9NR50 452 aaKnown RBP4.42□□□□□ -1.7
HTT-210ENST00000512909 SNTG1Q9NSN8 517 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 HYPKQ9NX55 129 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 ZDHHC7Q9NXF8 308 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 KIAA1456Q9P272 454 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 TBC1D14Q9P2M4 693 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 NLKQ9UBE8 527 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 DBF4Q9UBU7 674 aaPredicted RBP4.42□□□□□ -1.7
HTT-210ENST00000512909 CASZ1Q86V15 1759 aa4.42□□□□□ -1.7
HTT-210ENST00000512909 C5P01031 1676 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 CARMIL3Q8ND23 1372 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 LY75O60449 1722 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 SHANK3Q9BYB0 1731 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 TOGARAM1Q9Y4F4 1720 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 RGPD3A6NKT7 1758 aaPredicted RBP4.41□□□□□ -1.7
HTT-210ENST00000512909 RGPD4Q7Z3J3 1758 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 PABPN1LA6NDY0 278 aaKnown RBP4.41□□□□□ -1.7
HTT-210ENST00000512909 DDTLA6NHG4 134 aaPredicted RBP4.41□□□□□ -1.7
HTT-210ENST00000512909 E5RJQ4 531 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 STMND1H3BQB6 276 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 TLR2O60603 784 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 TACC1O75410 805 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 BAIAP3O94812 1187 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 MYZAPP0CAP1 466 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 CHRNB1P11230 501 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 KRT10P13645 584 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 PTPN2P17706 415 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 AVPR1AP37288 418 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 GABRB2P47870 512 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 GNAQP50148 359 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 CDH12P55289 794 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 SETQ01105 290 aaPredicted RBP4.41□□□□□ -1.7
HTT-210ENST00000512909 MAMLD1Q13495 774 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 DCTN2Q13561 401 aaKnown RBP4.41□□□□□ -1.7
HTT-210ENST00000512909 SEMA3AQ14563 771 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 RABEP1Q15276 862 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 RBMS2Q15434 407 aaKnown RBP4.41□□□□□ -1.7
HTT-210ENST00000512909 CCNG2Q16589 344 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 TWISTNBQ3B726 338 aaPredicted RBP4.41□□□□□ -1.7
HTT-210ENST00000512909 Q4G0T1 1027 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 FBXO43Q4G163 708 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 ATG9BQ674R7 924 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 ZNF626Q68DY1 528 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 ITPRIPL1Q6GPH6 555 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 NAPEPLDQ6IQ20 393 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 OLFM4Q6UX06 510 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 DEF8Q6ZN54 512 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 SLC46A3Q7Z3Q1 461 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 KDELC2Q7Z4H8 507 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 TBC1D26Q86UD7 250 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 ZDHHC23Q8IYP9 409 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 KIAA2013Q8IYS2 634 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 ZNF34Q8IZ26 560 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 ZCCHC9Q8N567 271 aaKnown RBP4.41□□□□□ -1.7
HTT-210ENST00000512909 ARFGAP1Q8N6T3 406 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 ZMIZ2Q8NF64 920 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 METTL6Q8TCB7 284 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 HDAC7Q8WUI4 952 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 SLC35F5Q8WV83 523 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 POMGNT1Q8WZA1 660 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 RPL36ALQ969Q0 106 aaKnown RBP4.41□□□□□ -1.7
HTT-210ENST00000512909 EME1Q96AY2 570 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 NCAPGQ9BPX3 1015 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 AGXT2Q9BYV1 514 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 B3GNT4Q9C0J1 378 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 LHPPQ9H008 270 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 BPIFA1Q9NP55 256 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 POT1Q9NUX5 634 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 CTNNAL1Q9UBT7 734 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 SEL1LQ9UBV2 794 aa4.41□□□□□ -1.7
HTT-210ENST00000512909 SLC25A10Q9UBX3 287 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms