RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 UCP3P55916 312 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 FAM3BP58499 235 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 ACTR3P61158 418 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 GPLD1P80108 840 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 TEKQ02763 1124 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 MZT1Q08AG7 82 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 CRYMQ14894 314 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 ZNF766Q5HY98 468 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 LIPMQ5VYY2 423 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 RAET1GQ6H3X3 334 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 MACC1Q6ZN28 852 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 TRILQ7L0X0 811 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 CILP2Q8IUL8 1156 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 PALM2Q8IXS6 379 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 UNC5BQ8IZJ1 945 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 CSGALNACT2Q8N6G5 542 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 C8orf58Q8NAV2 365 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 CLEC1AQ8NC01 280 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 GAB3Q8WWW8 586 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 ART5Q96L15 291 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 TRIB1Q96RU8 372 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 C17orf80Q9BSJ5 609 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 TSGA10Q9BZW7 698 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 ZNF350Q9GZX5 532 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 MTG2Q9H4K7 406 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 BEX4Q9NWD9 120 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 DDX25Q9UHL0 483 aaKnown RBP6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 OSGIN1Q9UJX0 560 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 NSFL1CQ9UNZ2 370 aaKnown RBP6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 SPATA31A3Q5VYP0 1347 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 LOC102723996A0A087X1L8 192 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 CBR3O75828 277 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 TFRCP02786 760 aaKnown RBP6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 IQCF3P0C7M6 154 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 CYP2F1P24903 491 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 HTR7P34969 479 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 MAP2K2P36507 400 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 CCR4P51679 360 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 STX1BP61266 288 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 TPM4P67936 248 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 SRSF11Q05519 484 aaKnown RBP6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 RAB3GAP1Q15042 981 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 WDR43Q15061 677 aaKnown RBP eCLIP6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 SYT16Q17RD7 645 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 MFSD14BQ5SR56 506 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 SFRP5Q5T4F7 317 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 PRAMEF8Q5VWM4 474 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 E4F1Q66K89 784 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 GPRIN1Q7Z2K8 1008 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 FAM219AQ8IW50 185 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 CMASQ8NFW8 434 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 ASCL2Q99929 193 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 GPR88Q9GZN0 384 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 RPF1Q9H9Y2 349 aaKnown RBP6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 NTN4Q9HB63 628 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 PRMT8Q9NR22 394 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 SETD4Q9NVD3 440 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 KCND2Q9NZV8 630 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 EMC3Q9P0I2 261 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 DDX19BQ9UMR2 479 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 ANKRD36BQ8N2N9 1353 aa6.33□□□□□ -1.4
TRAPPC11-209ENST00000512476 USP32Q8NFA0 1604 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 XRN1Q8IZH2 1706 aaKnown RBP6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 A0A1B0GTQ1 180 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 GOLGA8MH3BSY2 632 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 PLRG1O43660 514 aaKnown RBP6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 ZNF189O75820 626 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 CLPXO76031 633 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 CHRNA1P02708 482 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 PABPC4LP0CB38 370 aaKnown RBP6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 OR8G3PP0DMU2 310 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 CCDC192P0DO97 292 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 UMPSP11172 480 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 ACP5P13686 325 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 CPB1P15086 417 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 ADRA2CP18825 462 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 FPR1P21462 350 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 AXLP30530 894 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 THBS2P35442 1172 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 ATP5C1P36542 298 aaKnown RBP6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 AIF1P55008 147 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 DR1Q01658 176 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 FASTKD1Q53R41 847 aaKnown RBP6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 LCN1P1Q5VSP4 162 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 KIAA1161Q6NSJ0 714 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 TMEM88Q6PEY1 159 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 STEAP2Q8NFT2 490 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 CLHC1Q8NHS4 586 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 CCDC26Q8TAB7 109 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 CITED1Q99966 193 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 KATNB1Q9BVA0 655 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 PNNQ9H307 717 aaKnown RBP6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 LRRC40Q9H9A6 602 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 STOML1Q9UBI4 398 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 TRMT6Q9UJA5 497 aaKnown RBP6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 PTCH1Q13635 1447 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 NSD3Q9BZ95 1437 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 ADGRB2O60241 1585 aa6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC11-209ENST00000512476 HEATR9A2RTY3 570 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms