RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 ZNF212Q9UDV6 495 aa10.61□□□□□ -0.71
PDLIM5-217ENST00000512274 FETUBQ9UGM5 382 aa10.61□□□□□ -0.71
PDLIM5-217ENST00000512274 TRHDEQ9UKU6 1024 aa10.61□□□□□ -0.71
PDLIM5-217ENST00000512274 HS3ST4Q9Y661 456 aa10.61□□□□□ -0.71
PDLIM5-217ENST00000512274 PTPN13Q12923 2485 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 CXorf51AA0A1B0GTR3 108 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 ENO4A6NNW6 628 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 AGPSO00116 658 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 VILLO15195 856 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 ALOX15BO15296 676 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 SUV39H1O43463 412 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 CREB3O43889 395 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 USP12O75317 370 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 STK10O94804 968 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 MLNP12872 115 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 CR2P20023 1033 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 CCNCP24863 283 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 RBL1P28749 1068 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 GARSP41250 739 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 MAGEA3P43357 314 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 MAPKAPK2P49137 400 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 PMS2P54278 862 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 YBEYP58557 167 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 IFI35P80217 286 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 EFEMP1Q12805 493 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 LINC00303Q3SY05 128 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 MS4A13Q5J8X5 152 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 C10orf120Q5SQS8 335 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 PIK3R6Q5UE93 754 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 TTC39BQ5VTQ0 682 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 LRRC31Q6UY01 552 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 HTR3DQ70Z44 454 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 ZC3H18Q86VM9 953 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 ARHGAP12Q8IWW6 846 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 FAM217AQ8IXS0 508 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 ZNF366Q8N895 744 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 UCMAQ8WVF2 138 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 RNF34Q969K3 372 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 ORAI3Q9BRQ5 295 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 AASDHPPTQ9NRN7 309 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 SFMBT1Q9UHJ3 866 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 HEY1Q9Y5J3 304 aa10.6□□□□□ -0.71
PDLIM5-217ENST00000512274 SYNJ2BP-COX16A0A087WUM0 186 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 KCNN4O15554 427 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 MSI1O43347 362 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 RRP9O43818 475 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 SPAG6O75602 509 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 TTC4O95801 387 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 IFNB1P01574 187 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 HMBSP08397 361 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 VAV1P15498 845 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 ARL4CP56559 192 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 TLE1Q04724 770 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 WASHC5Q12768 1159 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 ILKQ13418 452 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 ENPP2Q13822 863 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 AUHQ13825 339 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 PARP6Q2NL67 630 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 TIGD7Q6NT04 549 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 SERPINA13PQ6UXR4 307 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 CENPUQ71F23 418 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 CHST9Q7L1S5 443 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 LSMEM2Q8N112 164 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 CACTIN-AS1Q8N1I8 211 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 NPWQ8N729 165 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 GOLGA6L1Q8N7Z2 621 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 MAML1Q92585 1016 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 P2RY11Q96G91 374 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 FAM118BQ9BPY3 351 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 DDX50Q9BQ39 737 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 ARHGAP9Q9BRR9 750 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 KLF16Q9BXK1 252 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 MAGEB5Q9BZ81 275 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 ROPN1BQ9BZX4 212 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 CIPCQ9C0C6 399 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 ZYG11BQ9C0D3 744 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 ROPN1Q9HAT0 212 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 XAB2Q9HCS7 855 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 TMPRSS4Q9NRS4 437 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 MARK1Q9P0L2 795 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 COX16Q9P0S2 106 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 SEPT3Q9UH03 358 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 LSM7Q9UK45 103 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 ZNF510Q9Y2H8 683 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 COL12A1Q99715 3063 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 DOCK4Q8N1I0 1966 aa10.59□□□□□ -0.71
PDLIM5-217ENST00000512274 SLC12A8A0AV02 714 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 GOLGA8KD6RF30 607 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 AP3B1O00203 1094 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 WNT9AO14904 365 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 RIPK2O43353 540 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 ACSL4O60488 711 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 GREM1O60565 184 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 SDC3O75056 442 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 KRT38O76015 456 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 SUN1O94901 812 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 IGHV4-34P06331 123 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 GSTA2P09210 222 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 ZSCAN5DPP0CG00 497 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 EPHA8P29322 1005 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms