RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 NIPA2Q8N8Q9 360 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 DENND6BQ8NEG7 585 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 ZNF548Q8NEK5 533 aaPredicted RBP5.87□□□□□ -1.47
RNF4-217ENST00000511892 HCAR2Q8TDS4 363 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 CXorf40AQ8TE69 158 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 UBE2Q2Q8WVN8 375 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 RFFLQ8WZ73 363 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 HSPH1Q92598 858 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 ZNF592Q92610 1267 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 FUBP1Q96AE4 644 aaKnown RBP5.87□□□□□ -1.47
RNF4-217ENST00000511892 ECHDC3Q96DC8 303 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 ZNF641Q96N77 438 aaPredicted RBP5.87□□□□□ -1.47
RNF4-217ENST00000511892 CSPG4P5Q96PW8 444 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 NUP85Q9BW27 656 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 TCEAL2Q9H3H9 227 aaPredicted RBP5.87□□□□□ -1.47
RNF4-217ENST00000511892 DEF6Q9H4E7 631 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 CCDC86Q9H6F5 360 aaKnown RBP5.87□□□□□ -1.47
RNF4-217ENST00000511892 ZWILCHQ9H900 591 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 NHEJ1Q9H9Q4 299 aaPredicted RBP5.87□□□□□ -1.47
RNF4-217ENST00000511892 PCDH12Q9NPG4 1184 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.87□□□□□ -1.47
RNF4-217ENST00000511892 DNAJC28Q9NX36 388 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 DONSONQ9NYP3 566 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 NLGN3Q9NZ94 848 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 DKK4Q9UBT3 224 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 IPO11Q9UI26 975 aaKnown RBP5.87□□□□□ -1.47
RNF4-217ENST00000511892 ANAPC7Q9UJX3 599 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 COQ6Q9Y2Z9 468 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 ATRXP46100 2492 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 CTAGE9A4FU28 777 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 BTNL10A8MVZ5 291 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 H3BRJ5 948 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 K7ESM1 405 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 PJA2O43164 708 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 AKR1B10O60218 316 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 MAFKO60675 156 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 GCATO75600 419 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 CD48P09326 243 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 CDK4P11802 303 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 C6P13671 934 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 JUPP14923 745 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 CD46P15529 392 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 JUNDP17535 347 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 GM2AP17900 193 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 CR2P20023 1033 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 EIF4A3P38919 411 aaKnown RBP5.86□□□□□ -1.47
RNF4-217ENST00000511892 ARHGAP25P42331 645 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 LIG3P49916 1009 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 SCNN1BP51168 640 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 SUOXP51687 545 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 ARSEP51690 589 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 ZNF135P52742 658 aaPredicted RBP5.86□□□□□ -1.47
RNF4-217ENST00000511892 HNRNPKP61978 463 aaKnown RBP eCLIP5.86□□□□□ -1.47
RNF4-217ENST00000511892 YPEL5P62699 121 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 SLC10A7Q0GE19 358 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 ELP6Q0PNE2 266 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 RALGDSQ12967 914 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 TARDBPQ13148 414 aaKnown RBP eCLIP5.86□□□□□ -1.47
RNF4-217ENST00000511892 PIGHQ14442 188 aaPredicted RBP5.86□□□□□ -1.47
RNF4-217ENST00000511892 LBRQ14739 615 aaKnown RBP5.86□□□□□ -1.47
RNF4-217ENST00000511892 GRM3Q14832 879 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 AGERQ15109 404 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 IRF4Q15306 451 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 WSCD2Q2TBF2 565 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 ATP13A4Q4VNC1 1196 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 CCDC122Q5T0U0 273 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 CDCP2Q5VXM1 449 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 KCTD16Q68DU8 428 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 BRAT1Q6PJG6 821 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 KIAA1328Q86T90 577 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 RBFAQ8N0V3 343 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 RNF10Q8N5U6 811 aaKnown RBP5.86□□□□□ -1.47
RNF4-217ENST00000511892 LZTR1Q8N653 840 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 CEP112Q8N8E3 955 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 DCBLD1Q8N8Z6 715 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 FAM181AQ8N9Y4 354 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 ACRBPQ8NEB7 543 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 TRIM58Q8NG06 486 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 FAM71BQ8TC56 605 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 TEKT4Q8WW24 435 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 CALR3Q96L12 384 aaKnown RBP5.86□□□□□ -1.47
RNF4-217ENST00000511892 APOLD1Q96LR9 279 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 ZNF599Q96NL3 588 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 PSKH2Q96QS6 385 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 TUBGCP5Q96RT8 1024 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 CHP1Q99653 195 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 NAPGQ99747 312 aaPredicted RBP5.86□□□□□ -1.47
RNF4-217ENST00000511892 NCAPGQ9BPX3 1015 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 DESI2Q9BSY9 194 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 CINPQ9BW66 212 aaPredicted RBP5.86□□□□□ -1.47
RNF4-217ENST00000511892 REPIN1Q9BWE0 567 aaKnown RBP5.86□□□□□ -1.47
RNF4-217ENST00000511892 PACSIN1Q9BY11 444 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 ATP13A3Q9H7F0 1226 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 SP110Q9HB58 689 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 PCDH18Q9HCL0 1135 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 SEPT3Q9UH03 358 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 IP6K2Q9UHH9 426 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 INTUQ9ULD6 942 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 ATP8A1Q9Y2Q0 1164 aa5.86□□□□□ -1.47
RNF4-217ENST00000511892 RAXQ9Y2V3 346 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms