RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 SEC31AO94979 1220 aaKnown RBP4□□□□□ -1.77
CAST-229ENST00000510098 MT-CYBP00156 380 aaPredicted RBP4□□□□□ -1.77
CAST-229ENST00000510098 TFP02787 698 aa4□□□□□ -1.77
CAST-229ENST00000510098 ARSBP15848 533 aa4□□□□□ -1.77
CAST-229ENST00000510098 HOXC13P31276 330 aa4□□□□□ -1.77
CAST-229ENST00000510098 CCKARP32238 428 aa4□□□□□ -1.77
CAST-229ENST00000510098 BSGP35613 385 aa4□□□□□ -1.77
CAST-229ENST00000510098 ARL3P36405 182 aa4□□□□□ -1.77
CAST-229ENST00000510098 RGS2P41220 211 aa4□□□□□ -1.77
CAST-229ENST00000510098 GABRB2P47870 512 aa4□□□□□ -1.77
CAST-229ENST00000510098 HTR6P50406 440 aa4□□□□□ -1.77
CAST-229ENST00000510098 ZP1P60852 638 aa4□□□□□ -1.77
CAST-229ENST00000510098 GOLGA8DPQ0D2H9 430 aa4□□□□□ -1.77
CAST-229ENST00000510098 WASHC5Q12768 1159 aa4□□□□□ -1.77
CAST-229ENST00000510098 ODF3L2Q3SX64 289 aa4□□□□□ -1.77
CAST-229ENST00000510098 ESCO2Q56NI9 601 aa4□□□□□ -1.77
CAST-229ENST00000510098 DCAF6Q58WW2 860 aa4□□□□□ -1.77
CAST-229ENST00000510098 RILPL1Q5EBL4 403 aa4□□□□□ -1.77
CAST-229ENST00000510098 PATL1Q86TB9 770 aaKnown RBP4□□□□□ -1.77
CAST-229ENST00000510098 VSIG1Q86XK7 387 aa4□□□□□ -1.77
CAST-229ENST00000510098 DHX40Q8IX18 779 aaKnown RBP4□□□□□ -1.77
CAST-229ENST00000510098 RPAP2Q8IXW5 612 aaPredicted RBP4□□□□□ -1.77
CAST-229ENST00000510098 PELI3Q8N2H9 469 aa4□□□□□ -1.77
CAST-229ENST00000510098 PARP16Q8N5Y8 322 aa4□□□□□ -1.77
CAST-229ENST00000510098 TEX45Q8NA69 505 aa4□□□□□ -1.77
CAST-229ENST00000510098 MIGA1Q8NAN2 632 aa4□□□□□ -1.77
CAST-229ENST00000510098 TMEM163Q8TC26 289 aa4□□□□□ -1.77
CAST-229ENST00000510098 SPATA17Q96L03 361 aa4□□□□□ -1.77
CAST-229ENST00000510098 MARK4Q96L34 752 aa4□□□□□ -1.77
CAST-229ENST00000510098 ADPGKQ9BRR6 497 aa4□□□□□ -1.77
CAST-229ENST00000510098 MRPL9Q9BYD2 267 aaKnown RBP4□□□□□ -1.77
CAST-229ENST00000510098 TXLNGYQ9BZA5 131 aa4□□□□□ -1.77
CAST-229ENST00000510098 RBM38Q9H0Z9 239 aaKnown RBP4□□□□□ -1.77
CAST-229ENST00000510098 ZWILCHQ9H900 591 aa4□□□□□ -1.77
CAST-229ENST00000510098 BRF2Q9HAW0 419 aa4□□□□□ -1.77
CAST-229ENST00000510098 LIMA1Q9UHB6 759 aaKnown RBP4□□□□□ -1.77
CAST-229ENST00000510098 MKLN1Q9UL63 735 aa4□□□□□ -1.77
CAST-229ENST00000510098 A3GALT2U3KPV4 340 aa4□□□□□ -1.77
CAST-229ENST00000510098 RSF1Q96T23 1441 aaPredicted RBP3.99□□□□□ -1.77
CAST-229ENST00000510098 USP17L23D6RBM5 183 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 NPIPB11E5RHQ5 1161 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 CLGNO14967 610 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 TGFB1I1O43294 461 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 LDB2O43679 373 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 ITM2AO43736 263 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 RGS11O94810 467 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 SCGB1D1O95968 90 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 FAM200BP0CF97 657 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 T-ENOLP0DO92 83 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 MYF6P23409 242 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 PSMA4P25789 261 aaKnown RBP3.99□□□□□ -1.77
CAST-229ENST00000510098 NFKBIAP25963 317 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 ICAM3P32942 547 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 ACTN2P35609 894 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 PIK3CAP42336 1068 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 CDKN2AP42771 156 aaKnown RBP3.99□□□□□ -1.77
CAST-229ENST00000510098 THBS3P49746 956 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 PGGT1BP53609 377 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 NANOS2P60321 138 aaKnown RBP3.99□□□□□ -1.77
CAST-229ENST00000510098 OLR1P78380 273 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 TMEM115Q12893 351 aaPredicted RBP3.99□□□□□ -1.77
CAST-229ENST00000510098 GRIK3Q13003 919 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 TCTN1Q2MV58 587 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 DNTTIP2Q5QJE6 756 aaKnown RBP3.99□□□□□ -1.77
CAST-229ENST00000510098 MON1BQ7L1V2 547 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 ZNF367Q7RTV3 350 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 PXKQ7Z7A4 578 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 GALNT13Q8IUC8 556 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 SFTPA2Q8IWL1 248 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 MB21D2Q8IYB1 491 aaPredicted RBP3.99□□□□□ -1.77
CAST-229ENST00000510098 NGEFQ8N5V2 710 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 GTF3C6Q969F1 213 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 INTS12Q96CB8 462 aaKnown RBP3.99□□□□□ -1.77
CAST-229ENST00000510098 NSUN4Q96CB9 384 aaKnown RBP3.99□□□□□ -1.77
CAST-229ENST00000510098 FBXL8Q96CD0 374 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 PABPC5Q96DU9 382 aaKnown RBP3.99□□□□□ -1.77
CAST-229ENST00000510098 THOC3Q96J01 351 aaKnown RBP3.99□□□□□ -1.77
CAST-229ENST00000510098 MRPL44Q9H9J2 332 aaKnown RBP3.99□□□□□ -1.77
CAST-229ENST00000510098 PLAC1Q9HBJ0 212 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.99□□□□□ -1.77
CAST-229ENST00000510098 HAO1Q9UJM8 370 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 ZHX1Q9UKY1 873 aaPredicted RBP3.99□□□□□ -1.77
CAST-229ENST00000510098 INTS6Q9UL03 887 aaKnown RBP3.99□□□□□ -1.77
CAST-229ENST00000510098 AAR2Q9Y312 384 aaKnown RBP3.99□□□□□ -1.77
CAST-229ENST00000510098 KCNE2Q9Y6J6 123 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 PIAS3Q9Y6X2 628 aa3.99□□□□□ -1.77
CAST-229ENST00000510098 A0A0U1RQF3 1178 aa3.98□□□□□ -1.77
CAST-229ENST00000510098 TRIM64A6NGJ6 449 aa3.98□□□□□ -1.77
CAST-229ENST00000510098 TRIM64BA6NI03 449 aa3.98□□□□□ -1.77
CAST-229ENST00000510098 BECN2A8MW95 431 aa3.98□□□□□ -1.77
CAST-229ENST00000510098 I6L893 689 aaPredicted RBP3.98□□□□□ -1.77
CAST-229ENST00000510098 VWA5AO00534 786 aa3.98□□□□□ -1.77
CAST-229ENST00000510098 TNFRSF13BO14836 293 aaPredicted RBP3.98□□□□□ -1.77
CAST-229ENST00000510098 SEC14L5O43304 696 aa3.98□□□□□ -1.77
CAST-229ENST00000510098 HNRNPCL1O60812 293 aaKnown RBP3.98□□□□□ -1.77
CAST-229ENST00000510098 KRT10P13645 584 aa3.98□□□□□ -1.77
CAST-229ENST00000510098 ETFAP13804 333 aa3.98□□□□□ -1.77
CAST-229ENST00000510098 MUTP22033 750 aa3.98□□□□□ -1.77
CAST-229ENST00000510098 PSMA3P25788 255 aa3.98□□□□□ -1.77
CAST-229ENST00000510098 THPOP40225 353 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms