RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	CPLX2	Q6PUV4	134 aa	Known RBP	3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SLC2A7	Q6PXP3	512 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CYP20A1	Q6UW02	462 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	KDELC2	Q7Z4H8	507 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SERPINA11	Q86U17	422 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TBC1D26	Q86UD7	250 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	DHX40	Q8IX18	779 aa	Known RBP	3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	FAM217A	Q8IXS0	508 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TMEM116	Q8NCL8	245 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TMEM170A	Q8WVE7	144 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	WDFY2	Q96P53	400 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SORCS2	Q96PQ0	1159 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	BBS4	Q96RK4	519 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	H2AFJ	Q9BTM1	129 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	LHPP	Q9H008	270 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	MUC13	Q9H3R2	512 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	EHD2	Q9NZN4	543 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ADD3	Q9UEY8	706 aa	Known RBP	3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	FAM96B	Q9Y3D0	163 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	RABGAP1	Q9Y3P9	1069 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	LYVE1	Q9Y5Y7	322 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	COX11	Q9Y6N1	276 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	AKAP12	Q02952	1782 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	XRN1	Q8IZH2	1706 aa	Known RBP	3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	C3	P01024	1663 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TMEM131L	A2VDJ0	1609 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	DIP2C	Q9Y2E4	1556 aa		3.29	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	MLH3	Q9UHC1	1453 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	POGZ	Q7Z3K3	1410 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	YTHDC2	Q9H6S0	1430 aa	Known RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	RIMS2	Q9UQ26	1411 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	RGPD1	P0DJD0	1748 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	NALCN	Q8IZF0	1738 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784		A6NNC1	897 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	FIBP	O43427	364 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	RBMXL2	O75526	392 aa	Known RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TOP3B	O95985	862 aa	Known RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	EIF2S1	P05198	315 aa	Known RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CHRNB1	P11230	501 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CTPS1	P17812	591 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ALOX12	P18054	663 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	GPR12	P47775	334 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	HMGN5	P82970	282 aa	Known RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CEBPZ	Q03701	1054 aa	Known RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CUL4A	Q13619	759 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CAPS	Q13938	189 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	KCTD2	Q14681	263 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	HIST2H2AC	Q16777	129 aa	Predicted RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	KRTAP15-1	Q3LI76	137 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	DPCR1	Q3MIW9	517 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	RILPL1	Q5EBL4	403 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	PIK3CD-AS1	Q5SR53	167 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TXNDC8	Q6A555	127 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	KLHL35	Q6PF15	583 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TSSK4	Q6SA08	328 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	C16orf54	Q6UWD8	224 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	GPSM1	Q86YR5	675 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TMC8	Q8IU68	726 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ZCCHC9	Q8N567	271 aa	Known RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	WDTC1	Q8N5D0	677 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	FAM184A	Q8NB25	1140 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	PIBF1	Q8WXW3	757 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	GTF3C6	Q969F1	213 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SYAP1	Q96A49	352 aa	Predicted RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	RNF183	Q96D59	192 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ZG16B	Q96DA0	208 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	PABPC5	Q96DU9	382 aa	Known RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ZC3HAV1L	Q96H79	300 aa	Known RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	RSRC1	Q96IZ7	334 aa	Known RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	YME1L1	Q96TA2	773 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	NUDT16L1	Q9BRJ7	211 aa	Known RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	WDR83	Q9BRX9	315 aa	Known RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CENPO	Q9BU64	300 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	API5	Q9BZZ5	524 aa	Known RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	B3GNT4	Q9C0J1	378 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CCDC68	Q9H2F9	335 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TMPRSS5	Q9H3S3	457 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	TSPY26P	Q9H489	355 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SYNC	Q9H7C4	482 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	POLR1B	Q9H9Y6	1135 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SCPEP1	Q9HB40	452 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	FBRSL1	Q9HCM7	1045 aa	Known RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	RNF146	Q9NTX7	359 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SPATS2L	Q9NUQ6	558 aa	Known RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	HCFC1R1	Q9NWW0	138 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	NSMCE4A	Q9NXX6	385 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	NCKIPSD	Q9NZQ3	722 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	FLRT1	Q9NZU1	646 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	MSRB1	Q9NZV6	116 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SEL1L	Q9UBV2	794 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SLCO3A1	Q9UIG8	710 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	HAO1	Q9UJM8	370 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	ZNF215	Q9UL58	517 aa	Predicted RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CARD8	Q9Y2G2	431 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	SLC4A4	Q9Y6R1	1079 aa		3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	CHD2	O14647	1828 aa	Known RBP	3.28	□□□□□ -1.88
CALCOCO2-216	ENST00000509784	FMN2	Q9NZ56	1722 aa		3.27	□□□□□ -1.89

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms