RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 HDAC11Q96DB2 347 aa18.71■□□□□ 0.59
UBE3D-207ENST00000509102 NXPE2Q96DL1 559 aa18.71■□□□□ 0.59
UBE3D-207ENST00000509102 NUS1Q96E22 293 aa18.71■□□□□ 0.59
UBE3D-207ENST00000509102 WDR92Q96MX6 357 aa18.71■□□□□ 0.59
UBE3D-207ENST00000509102 LRRC61Q9BV99 259 aa18.71■□□□□ 0.59
UBE3D-207ENST00000509102 WDR26Q9H7D7 661 aa18.71■□□□□ 0.59
UBE3D-207ENST00000509102 CLCA2Q9UQC9 943 aa18.71■□□□□ 0.59
UBE3D-207ENST00000509102 RAI2Q9Y5P3 530 aa18.71■□□□□ 0.59
UBE3D-207ENST00000509102 ARID1BQ8NFD5 2236 aaPredicted RBP18.7■□□□□ 0.58
UBE3D-207ENST00000509102 PSMD11O00231 422 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 APOL1O14791 398 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 IPO7O95373 1038 aaKnown RBP18.7■□□□□ 0.58
UBE3D-207ENST00000509102 MAP3K6O95382 1288 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 TNFP01375 233 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 GIMD1P0DJR0 217 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 MAGEA1P43355 309 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 SRP54P61011 504 aaKnown RBP18.7■□□□□ 0.58
UBE3D-207ENST00000509102 GBE1Q04446 702 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 TRAF2Q12933 501 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 NR0B2Q15466 257 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 DENND2CQ68D51 928 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 PROSER1Q86XN7 944 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 GKN2Q86XP6 184 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 CCDC13Q8IYE1 715 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 CCDC170Q8IYT3 715 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 TPCN2Q8NHX9 752 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 SCRN2Q96FV2 425 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 DNPEPQ9ULA0 475 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 HEY1Q9Y5J3 304 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 SHROOM3Q8TF72 1996 aa18.7■□□□□ 0.58
UBE3D-207ENST00000509102 GOLGA4Q13439 2230 aaKnown RBP18.69■□□□□ 0.58
UBE3D-207ENST00000509102 SRRM3A6NNA2 597 aaPredicted RBP18.69■□□□□ 0.58
UBE3D-207ENST00000509102 KRT37O76014 449 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 HEXIM1O94992 359 aaKnown RBP18.69■□□□□ 0.58
UBE3D-207ENST00000509102 TNNT1P13805 278 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 TSHRP16473 764 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 KIAA1024LP59773 190 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 TARDBPQ13148 414 aaKnown RBP eCLIP18.69■□□□□ 0.588e-6■□□□□ 10.7
UBE3D-207ENST00000509102 C1orf61Q13536 156 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 TCEAL1Q15170 157 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 CNGA3Q16281 694 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 ALG11Q2TAA5 492 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 LVRNQ6Q4G3 990 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 CACTIN-AS1Q8N1I8 211 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.69■□□□□ 0.58
UBE3D-207ENST00000509102 PQLC3Q8N755 202 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 TC2NQ8N9U0 490 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 MDM1Q8TC05 714 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 IFI44Q8TCB0 444 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 NAT6Q93015 286 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 TSACCQ96A04 125 aaPredicted RBP18.69■□□□□ 0.58
UBE3D-207ENST00000509102 DTLQ9NZJ0 730 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 DKK4Q9UBT3 224 aa18.69■□□□□ 0.58
UBE3D-207ENST00000509102 CPED1A4D0V7 1026 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 GOLGA6CA6NDK9 693 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 GOLGA6BA6NDN3 693 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 PPP1R12AO14974 1030 aaPredicted RBP18.68■□□□□ 0.58
UBE3D-207ENST00000509102 HOXC4P09017 264 aaPredicted RBP18.68■□□□□ 0.58
UBE3D-207ENST00000509102 GOLGA6DP0CG33 693 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 INSM1Q01101 510 aaPredicted RBP18.68■□□□□ 0.58
UBE3D-207ENST00000509102 PDK1Q15118 436 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 CDKN3Q16667 212 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 C6orf132Q5T0Z8 1188 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 ALG1LQ6GMV1 187 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 PNCKQ6P2M8 343 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 BZW1Q7L1Q6 419 aaKnown RBP18.68■□□□□ 0.58
UBE3D-207ENST00000509102 MARCH9Q86YJ5 346 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 RFX6Q8HWS3 928 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 PLA2G15Q8NCC3 412 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 OR56A4Q8NGH8 313 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 MAPK15Q8TD08 544 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 NSMCE3Q96MG7 304 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 DEPDC7Q96QD5 511 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 TCEAL2Q9H3H9 227 aaPredicted RBP18.68■□□□□ 0.58
UBE3D-207ENST00000509102 PHPT1Q9NRX4 125 aaPredicted RBP18.68■□□□□ 0.58
UBE3D-207ENST00000509102 GOLGA6AQ9NYA3 693 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 DGKBQ9Y6T7 804 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 PLXNB3Q9ULL4 1909 aa18.68■□□□□ 0.58
UBE3D-207ENST00000509102 ASPMQ8IZT6 3477 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 TNFRSF10CO14798 259 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 OPA1O60313 960 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 GCATO75600 419 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 MT-CO3P00414 261 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 ZNF30P17039 623 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 COMTP21964 271 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 RPL26P61254 145 aaKnown RBP18.67■□□□□ 0.58
UBE3D-207ENST00000509102 DSC2Q02487 901 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 CYP4F3Q08477 520 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 PPIDQ08752 370 aaKnown RBP18.67■□□□□ 0.58
UBE3D-207ENST00000509102 AP1B1Q10567 949 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 CAMK2BQ13554 666 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 TFDP2Q14188 446 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 FUBP1Q96AE4 644 aaKnown RBP18.67■□□□□ 0.58
UBE3D-207ENST00000509102 DTD2Q96FN9 168 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 MRFAP1L1Q96HT8 127 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 COQ10AQ96MF6 247 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 MCCC1Q96RQ3 725 aaPredicted RBP18.67■□□□□ 0.58
UBE3D-207ENST00000509102 BOCQ9BWV1 1114 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 BRD8Q9H0E9 1235 aa18.67■□□□□ 0.58
UBE3D-207ENST00000509102 CAAP1Q9H8G2 361 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms