RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 LRRC8EQ6NSJ5 796 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 TMCO3Q6UWJ1 677 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 LCTLQ6UWM7 567 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 GPSM1Q86YR5 675 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 RNF168Q8IYW5 571 aaPredicted RBP3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 PARP16Q8N5Y8 322 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 ARFGAP1Q8N6T3 406 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 LSMEM1Q8N8F7 131 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 SCCPDHQ8NBX0 429 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 GABPB2Q8TAK5 448 aaPredicted RBP3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 DDB2Q92466 427 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 LPAR1Q92633 364 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 SLC41A2Q96JW4 573 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 SEPT5Q99719 369 aaPredicted RBP3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 FAM110AQ9BQ89 295 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 TMEM47Q9BQJ4 181 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 C1QTNF1Q9BXJ1 281 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 IFIH1Q9BYX4 1025 aaKnown RBP3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 NPFFR1Q9GZQ6 430 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 CATSPERBQ9H7T0 1116 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 MORF4L1Q9UBU8 362 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 RPS6KA6Q9UK32 745 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 COG5Q9UP83 839 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 HS3ST3B1Q9Y662 390 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 ZNF804BA4D1E1 1349 aa3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 ZNF644Q9H582 1327 aaPredicted RBP3.87□□□□□ -1.79
COL4A3BP-205ENST00000508692 POLR2AP24928 1970 aaKnown RBP3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 SNAP23O00161 211 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 HS6ST1O60243 411 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 BEST1O76090 585 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 RGS11O94810 467 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 NKX2-2O95096 273 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 TMEM191BP0C7N4 346 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 NR2F1P10589 423 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 AKR1B1P15121 316 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 GCH1P30793 250 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 NNMTP40261 264 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 EIF2DP41214 584 aaKnown RBP3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 PPP3CCP48454 512 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 LMAN1P49257 510 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 MRPL12P52815 198 aaKnown RBP3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 TMPRSS3P57727 454 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 SORDQ00796 357 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 NAE1Q13564 534 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 DUSP6Q16828 381 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 COL28A1Q2UY09 1125 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 PCGF3Q3KNV8 242 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 SGO1Q5FBB7 561 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 MTX3Q5HYI7 312 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 CXorf66Q5JRM2 361 aaPredicted RBP3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 SLC2A7Q6PXP3 512 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 SHC4Q6S5L8 630 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 PRPF39Q86UA1 669 aaKnown RBP3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 MB21D2Q8IYB1 491 aaPredicted RBP3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 MMP21Q8N119 569 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 TMTC2Q8N394 836 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 AGBL3Q8NEM8 1001 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 HUS1BQ8NHY5 278 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 SCARB1Q8WTV0 552 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 MMTAG2Q9BU76 263 aaKnown RBP3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 MSTO1Q9BUK6 570 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 ISCUQ9H1K1 167 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 CYSLTR2Q9NS75 346 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 OGFRQ9NZT2 677 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 IL36RNQ9UBH0 155 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 CNOT8Q9UFF9 292 aaKnown RBP3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 PCDHGB4Q9UN71 923 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 BTBD3Q9Y2F9 522 aa3.86□□□□□ -1.79
COL4A3BP-205ENST00000508692 A0A1W2PPC1 479 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 A0A1W2PQ09 198 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 TMEM202A6NGA9 273 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 FAM90A8PA6NJQ4 464 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 MS4A18H0YCH9 400 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 ADAM10O14672 748 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 JRKO75564 520 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 NDUFB8O95169 186 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 EPN2O95208 641 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 HIST1H2ABP04908 130 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 SRPRAP08240 638 aaKnown RBP3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 FAM90A13PP0C7W8 464 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 FAM90A24PP0C7X0 464 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 CYP19A1P11511 503 aaPredicted RBP3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 ARSBP15848 533 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 GABRB1P18505 474 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 HIST1H2ADP20671 130 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 GNLYP22749 145 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 ACSL1P33121 698 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 KCNJ4P48050 445 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 ENTPD1P49961 510 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 PLCD1P51178 756 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 SELENOVP59797 346 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 SSBP2P81877 361 aaPredicted RBP3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 ACSM2AQ08AH3 577 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 RBMS2Q15434 407 aaKnown RBP3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 NTRK2Q16620 822 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 Q4G0T1 1027 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 WASHC2DQ5SRD0 308 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 DCAF12L2Q5VW00 463 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 ACSM2BQ68CK6 577 aa3.85□□□□□ -1.79
COL4A3BP-205ENST00000508692 GPR139Q6DWJ6 353 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms