RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 MAP9Q49MG5 647 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 SLC27A1Q6PCB7 646 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 KCTD8Q6ZWB6 473 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 RNF113BQ8IZP6 322 aaKnown RBP2.86□□□□□ -1.95
GYPB-209ENST00000508618 PARP16Q8N5Y8 322 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 FAM222BQ8WU58 562 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 TM9SF4Q92544 642 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 ABTB1Q969K4 478 aaPredicted RBP2.86□□□□□ -1.95
GYPB-209ENST00000508618 TNIP3Q96KP6 325 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 ELAC2Q9BQ52 826 aaKnown RBP2.86□□□□□ -1.95
GYPB-209ENST00000508618 HAUS8Q9BT25 410 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 PDZD7Q9H5P4 517 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 TTC12Q9H892 705 aaPredicted RBP2.86□□□□□ -1.95
GYPB-209ENST00000508618 NLRC4Q9NPP4 1024 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 ZDHHC18Q9NUE0 388 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.86□□□□□ -1.95
GYPB-209ENST00000508618 TINAGQ9UJW2 476 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 DLGAP4Q9Y2H0 992 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 NFE2L3Q9Y4A8 694 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 A3GALT2U3KPV4 340 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 PDS5AQ29RF7 1337 aaKnown RBP2.86□□□□□ -1.95
GYPB-209ENST00000508618 HSPB2A8KAH6 182 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 H0Y3Z8 333 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 TCERG1O14776 1098 aaKnown RBP2.85□□□□□ -1.95
GYPB-209ENST00000508618 WDR1O75083 606 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 ATP2C2O75185 946 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 MTA2O94776 668 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 PCNAP12004 261 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 PTPN2P17706 415 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 HTR3AP46098 478 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 NEDD9Q14511 834 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 ARHGEF6Q15052 776 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 HSPB2Q16082 182 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 TANGO2Q6ICL3 276 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 TOGARAM2Q6ZUX3 1019 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 FOXRED2Q8IWF2 684 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 ZNF440Q8IYI8 595 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 SCCPDHQ8NBX0 429 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 AGBL3Q8NEM8 1001 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 DNAAF1Q8NEP3 725 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 TAAR8Q969N4 342 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 SLC39A13Q96H72 371 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 LINC00479Q96M42 142 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 TRAPPC9Q96Q05 1148 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 KXD1Q9BQD3 176 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 TRIM15Q9C019 465 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 CTDSP1Q9GZU7 261 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 PADI1Q9ULC6 663 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 FAF1Q9UNN5 650 aaPredicted RBP2.85□□□□□ -1.95
GYPB-209ENST00000508618 ADGRF5Q8IZF2 1346 aa2.85□□□□□ -1.95
GYPB-209ENST00000508618 TYW5A2RUC4 315 aaKnown RBP2.84□□□□□ -1.95
GYPB-209ENST00000508618 SMIM1B2RUZ4 78 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 HHLA1C9JL84 531 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 PSMD14O00487 310 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 SKAP2O75563 359 aaPredicted RBP2.84□□□□□ -1.95
GYPB-209ENST00000508618 IGHV4-39P01824 125 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 CHRM4P08173 479 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 PRSS56P0CW18 603 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 GNB3P16520 340 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 CHRNB4P30926 498 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 HNF1BP35680 557 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 GNL1P36915 607 aaPredicted RBP2.84□□□□□ -1.95
GYPB-209ENST00000508618 SERPINF1P36955 418 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 NR1H2P55055 460 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 EEF1A1P68104 462 aaKnown RBP2.84□□□□□ -1.95
GYPB-209ENST00000508618 SIRPB2Q5JXA9 342 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 SH2D4BQ5SQS7 431 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 STXBP5Q5T5C0 1151 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 EEF1A1P5Q5VTE0 462 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 XRRA1Q6P2D8 792 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 METTL7BQ6UX53 244 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 IL20RBQ6UXL0 311 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 B3GNT6Q6ZMB0 384 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 PRSS45Q7RTY3 260 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 CHD1LQ86WJ1 897 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 CCDC117Q8IWD4 279 aaPredicted RBP2.84□□□□□ -1.95
GYPB-209ENST00000508618 AMER3Q8N944 861 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 GJC3Q8NFK1 279 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 HSPH1Q92598 858 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 MASTLQ96GX5 879 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 ZNF414Q96IQ9 312 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 ST6GAL2Q96JF0 529 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 ART5Q96L15 291 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 RBM4BQ9BQ04 359 aaKnown RBP2.84□□□□□ -1.95
GYPB-209ENST00000508618 WDR12Q9GZL7 423 aaKnown RBP2.84□□□□□ -1.95
GYPB-209ENST00000508618 ARFGAP3Q9NP61 516 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 CNGB3Q9NQW8 809 aa2.84□□□□□ -1.95
GYPB-209ENST00000508618 CISD1Q9NZ45 108 aaKnown RBP2.84□□□□□ -1.95
GYPB-209ENST00000508618 A0A087WV62 115 aa2.83□□□□□ -1.96
GYPB-209ENST00000508618 KLRF2D3W0D1 207 aa2.83□□□□□ -1.96
GYPB-209ENST00000508618 KLK8O60259 260 aa2.83□□□□□ -1.96
GYPB-209ENST00000508618 PRKNO60260 465 aaPredicted RBP2.83□□□□□ -1.96
GYPB-209ENST00000508618 ERVK-10P10266 1014 aa2.83□□□□□ -1.96
GYPB-209ENST00000508618 DDX5P17844 614 aaKnown RBP2.83□□□□□ -1.96
GYPB-209ENST00000508618 RRM1P23921 792 aa2.83□□□□□ -1.96
GYPB-209ENST00000508618 SERPINB3P29508 390 aa2.83□□□□□ -1.96
GYPB-209ENST00000508618 HOXC8P31273 242 aa2.83□□□□□ -1.96
GYPB-209ENST00000508618 GALNT1Q10472 559 aaPredicted RBP2.83□□□□□ -1.96
GYPB-209ENST00000508618 SLC18A3Q16572 532 aa2.83□□□□□ -1.96
GYPB-209ENST00000508618 PFKFB4Q16877 469 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms