RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 CSPG5O95196 566 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 APBA3O96018 575 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 NPPAP01160 153 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 F11P03951 625 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 AMHP03971 560 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 INHAP05111 366 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 ALOX5P09917 674 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 JUNBP17275 347 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 PTPN1P18031 435 aaKnown RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 ERCC2P18074 760 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 NFKB1P19838 968 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 CCNA2P20248 432 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 SAT1P21673 171 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 WARSP23381 471 aaKnown RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 MAP4P27816 1152 aaKnown RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 AXLP30530 894 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 CAPGP40121 348 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 GRIA3P42263 894 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 DPP6P42658 865 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 MRPL19P49406 292 aaKnown RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 TAF6P49848 677 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 ENTPD1P49961 510 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 CLCN3P51790 818 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC7A2P52569 658 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 NDST2P52849 883 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 GJA9P57773 515 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 PRAMEP78395 509 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 PFKPQ01813 784 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 OCA2Q04671 838 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 TNK2Q07912 1038 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 GRIK2Q13002 908 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 TOP3AQ13472 1001 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 DGKZQ13574 1117 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 GK3PQ14409 553 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 KCTD2Q14681 263 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 ACAP2Q15057 778 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 RPS6KA2Q15349 733 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 DLG2Q15700 870 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 ATP6AP1Q15904 470 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 LY6KQ17RY6 165 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 RGS21Q2M5E4 152 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC36A3Q495N2 470 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 FBXO47Q5MNV8 452 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 CCNYL2Q5T2Q4 361 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 CERCAMQ5T4B2 595 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 BROXQ5VW32 411 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 TMEM198Q66K66 360 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 TIGD7Q6NT04 549 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 C8orf82Q6P1X6 216 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 ATG14Q6ZNE5 492 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 GADL1Q6ZQY3 521 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 PRR23BQ6ZRT6 265 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 FASTKD5Q7L8L6 764 aaKnown RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 BNIPLQ7Z465 357 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 SPATA19Q7Z5L4 167 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 SPRED1Q7Z699 444 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 CUZD1Q86UP6 607 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 LRRC49Q8IUZ0 686 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC41A1Q8IVJ1 513 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 HOMEZQ8IX15 550 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 CENPLQ8N0S6 344 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 CLYBLQ8N0X4 340 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 MYO1HQ8N1T3 1032 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 PYROXD2Q8N2H3 581 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 MIER2Q8N344 545 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 SFRP1Q8N474 314 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 TMEM151AQ8N4L1 468 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 AADATQ8N5Z0 425 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 LZTR1Q8N653 840 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 TOP6BLQ8N6T0 577 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 PCDH20Q8N6Y1 951 aaKnown RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 C2CD4AQ8NCU7 369 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 TRPV3Q8NET8 790 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 APPL2Q8NEU8 664 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 RAB2BQ8WUD1 216 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 CHPT1Q8WUD6 406 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 SNRNP27Q8WVK2 155 aaKnown RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLCO4A1Q96BD0 722 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 NXNL1Q96CM4 212 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 L3HYPDHQ96EM0 354 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 MFSD3Q96ES6 412 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 HSPBAP1Q96EW2 488 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 PGAP3Q96FM1 320 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 PLEKHA8Q96JA3 519 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 PPP1R36Q96LQ0 422 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 CCDC138Q96M89 665 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 RDH12Q96NR8 316 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 FCRL5Q96RD9 977 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 HNRNPABQ99729 332 aaKnown RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 APBA2Q99767 749 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 TBL1YQ9BQ87 522 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 BCL7BQ9BQE9 202 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 FDXACB1Q9BRP7 624 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 BDH2Q9BUT1 245 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 NPLQ9BXD5 320 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 TDRD1Q9BXT4 1180 aaKnown RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 DUSP16Q9BY84 665 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 B3GNT5Q9BYG0 378 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 MAGEB5Q9BZ81 275 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 PAIP1Q9H074 479 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms