RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 HEXIM1O94992 359 aaKnown RBP20.12■□□□□ 0.81
USP53-203ENST00000507597 ATXN1LP0C7T5 689 aaKnown RBP20.12■□□□□ 0.81
USP53-203ENST00000507597 MLNP12872 115 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 NPY2RP49146 381 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 LIG3P49916 1009 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 CAV1Q03135 178 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 MORF4L2Q15014 288 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 FAM182AQ5T1J6 154 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 IZUMO3Q5VZ72 239 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 LRRC8BQ6P9F7 803 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 LIPIQ6XZB0 460 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 RGL4Q8IZJ4 473 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 FAM160A2Q8N612 972 aaPredicted RBP20.12■□□□□ 0.81
USP53-203ENST00000507597 SKA1Q96BD8 255 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 LOXL4Q96JB6 756 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 SLC17A9Q9BYT1 436 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 CD93Q9NPY3 652 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 MBD1Q9UIS9 605 aaPredicted RBP20.12■□□□□ 0.81
USP53-203ENST00000507597 PKP3Q9Y446 797 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 MMP20O60882 483 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 ALPIP09923 528 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 GNSP15586 552 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 AKT2P31751 481 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 DRG2P55039 364 aaKnown RBP20.11■□□□□ 0.81
USP53-203ENST00000507597 SPARCL1Q14515 664 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 ACOX1Q15067 660 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 PLK5Q496M5 336 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 LRRC73Q5JTD7 316 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 LYSMD4Q5XG99 296 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 PMS2CLQ68D20 193 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 CRTC1Q6UUV9 634 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 PRR23BQ6ZRT6 265 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 NLRP9Q7RTR0 991 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 GLT6D1Q7Z4J2 308 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 RABEPKQ7Z6M1 372 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 NRSN1Q8IZ57 195 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 BLOC1S5Q8TDH9 187 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 CPT1BQ92523 772 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 SNX19Q92543 992 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 C19orf43Q9BQ61 176 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 C6orf106Q9H6K1 298 aaPredicted RBP20.11■□□□□ 0.81
USP53-203ENST00000507597 WHRNQ9P202 907 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 SUSD2Q9UGT4 822 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 ANAPC5Q9UJX4 755 aa20.11■□□□□ 0.81
USP53-203ENST00000507597 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 IGLON5A6NGN9 336 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 NPIPB15A6NHN6 443 aaPredicted RBP20.1■□□□□ 0.81
USP53-203ENST00000507597 WNT9AO14904 365 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 USP12O75317 370 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 PRKCGP05129 697 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 PYGLP06737 847 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 C6P13671 934 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 BCKDHBP21953 392 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 CD27P26842 260 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 DHPSP49366 369 aaPredicted RBP20.1■□□□□ 0.81
USP53-203ENST00000507597 KCNJ11Q14654 390 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 AGERQ15109 404 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 TAF1AQ15573 450 aaPredicted RBP20.1■□□□□ 0.81
USP53-203ENST00000507597 LRRC66Q68CR7 880 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 TMEFF1Q8IYR6 380 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 DENND6BQ8NEG7 585 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 PRSS33Q8NF86 280 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 OR52K1Q8NGK4 314 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 HSPA12BQ96MM6 686 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 LENG8Q96PV6 779 aaPredicted RBP20.1■□□□□ 0.81
USP53-203ENST00000507597 APOL2Q9BQE5 337 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 TRIM51Q9BSJ1 452 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 WRAP53Q9BUR4 548 aaKnown RBP20.1■□□□□ 0.81
USP53-203ENST00000507597 C1QTNF2Q9BXJ5 285 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 TRIM31Q9BZY9 425 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 IL22Q9GZX6 179 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 CASS4Q9NQ75 786 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 SHOC2Q9UQ13 582 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 ITM2BQ9Y287 266 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.1■□□□□ 0.81
USP53-203ENST00000507597 ZNF711Q9Y462 761 aa20.1■□□□□ 0.81
USP53-203ENST00000507597 A0A1W2PPC4 97 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 MAGEB16A2A368 324 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 HEATR9A2RTY3 570 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 A8MX80 341 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 PRR5-ARHGAP8B1AHC4 643 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 PRAMEF26H0Y7S4 382 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 LATO43561 262 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 MAGEC1O60732 1142 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 HNRNPA2B1P22626 353 aaKnown RBP20.09■□□□□ 0.81
USP53-203ENST00000507597 HADHAP40939 763 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 CHRNA4P43681 627 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 TERF1P54274 439 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 TCF15Q12870 199 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 RALGDSQ12967 914 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 CNGA3Q16281 694 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 ZNF284Q2VY69 593 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 TMEM259Q4ZIN3 620 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 RNASEH2BQ5TBB1 312 aaKnown RBP20.09■□□□□ 0.81
USP53-203ENST00000507597 DENND2CQ68D51 928 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 CYP2U1Q7Z449 544 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 FRMD1Q8N878 549 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 NAT8LQ8N9F0 302 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 BIRC7Q96CA5 298 aa20.09■□□□□ 0.81
USP53-203ENST00000507597 LRRC1Q9BTT6 524 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms