RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 DDX5P17844 614 aaKnown RBP2.94□□□□□ -1.94
GYPB-207ENST00000506679 ITGB6P18564 788 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 CTCFP49711 727 aaPredicted RBP2.94□□□□□ -1.94
GYPB-207ENST00000506679 PDLIM4P50479 330 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 DSCR9P59020 149 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 BRWD1-AS2P59051 145 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 OLR1P78380 273 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 TMEM115Q12893 351 aaPredicted RBP2.94□□□□□ -1.94
GYPB-207ENST00000506679 DDX10Q13206 875 aaKnown RBP2.94□□□□□ -1.94
GYPB-207ENST00000506679 ITGADQ13349 1161 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 OLIG2Q13516 323 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 DHX34Q14147 1143 aaKnown RBP2.94□□□□□ -1.94
GYPB-207ENST00000506679 PLCB4Q15147 1175 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 TBCEQ15813 527 aaPredicted RBP2.94□□□□□ -1.94
GYPB-207ENST00000506679 KRT24Q2M2I5 525 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 MMEL1Q495T6 779 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 C6orf141Q5SZD1 244 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 TYW3Q6IPR3 259 aaKnown RBP2.94□□□□□ -1.94
GYPB-207ENST00000506679 CRELD2Q6UXH1 353 aaPredicted RBP2.94□□□□□ -1.94
GYPB-207ENST00000506679 ATF7IPQ6VMQ6 1270 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 TMTC3Q6ZXV5 915 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.94□□□□□ -1.94
GYPB-207ENST00000506679 FJX1Q86VR8 437 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 WDR63Q8IWG1 891 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 ADHFE1Q8IWW8 467 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 ZCCHC9Q8N567 271 aaKnown RBP2.94□□□□□ -1.94
GYPB-207ENST00000506679 ETNPPLQ8TBG4 499 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 GTF3C6Q969F1 213 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 MED30Q96HR3 178 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 THOC3Q96J01 351 aaKnown RBP2.94□□□□□ -1.94
GYPB-207ENST00000506679 FIZ1Q96SL8 496 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 GAREM1Q9H706 876 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 SLCO3A1Q9UIG8 710 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 HAO1Q9UJM8 370 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 FBXO9Q9UK97 447 aaPredicted RBP2.94□□□□□ -1.94
GYPB-207ENST00000506679 MKLN1Q9UL63 735 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 CDC14AQ9UNH5 594 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 PAM16Q9Y3D7 125 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 TAF1P21675 1872 aa2.94□□□□□ -1.94
GYPB-207ENST00000506679 PLRG1O43660 514 aaKnown RBP2.93□□□□□ -1.94
GYPB-207ENST00000506679 ZIC3O60481 467 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 CYC1P08574 325 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 CD53P19397 219 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 MAN1A1P33908 653 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 PIP4K2AP48426 406 aaPredicted RBP2.93□□□□□ -1.94
GYPB-207ENST00000506679 RXRGP48443 463 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 METAP2P50579 478 aaKnown RBP eCLIP2.93□□□□□ -1.94
GYPB-207ENST00000506679 TUBA1BP68363 451 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 GRSF1Q12849 480 aaKnown RBP eCLIP2.93□□□□□ -1.94
GYPB-207ENST00000506679 DCTN2Q13561 401 aaKnown RBP2.93□□□□□ -1.94
GYPB-207ENST00000506679 NEDD9Q14511 834 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 HLFQ16534 295 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 CCNG2Q16589 344 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 COL28A1Q2UY09 1125 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 USP41Q3LFD5 358 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 AMZ1Q400G9 498 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 C9orf57Q5W0N0 161 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 ZNF324BQ6AW86 544 aaPredicted RBP2.93□□□□□ -1.94
GYPB-207ENST00000506679 B3GNT6Q6ZMB0 384 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 C1orf122Q6ZSJ8 110 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 ZC3HC1Q86WB0 502 aaKnown RBP2.93□□□□□ -1.94
GYPB-207ENST00000506679 CHERPQ8IWX8 916 aaKnown RBP2.93□□□□□ -1.94
GYPB-207ENST00000506679 CNTROBQ8N137 903 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 PGBD5Q8N414 524 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 PAF1Q8N7H5 531 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 TMEM116Q8NCL8 245 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 SPATA22Q8NHS9 363 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 WFIKKN2Q8TEU8 576 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 TMED6Q8WW62 240 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 FAM149B1Q96BN6 582 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 INTS12Q96CB8 462 aaKnown RBP2.93□□□□□ -1.94
GYPB-207ENST00000506679 NAP1L4Q99733 375 aaKnown RBP2.93□□□□□ -1.94
GYPB-207ENST00000506679 C1QTNF5Q9BXJ0 243 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 TM6SF1Q9BZW5 370 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 MUC13Q9H3R2 512 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 C17orf75Q9HAS0 396 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 MMP25Q9NPA2 562 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 SLC9A2Q9UBY0 812 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 TINAGQ9UJW2 476 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 ZNF580Q9UK33 172 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 AAR2Q9Y312 384 aaKnown RBP2.93□□□□□ -1.94
GYPB-207ENST00000506679 CEPT1Q9Y6K0 416 aa2.93□□□□□ -1.94
GYPB-207ENST00000506679 IGLV5-37A0A075B6J1 123 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 SNAP23O00161 211 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 USO1O60763 962 aaKnown RBP2.92□□□□□ -1.94
GYPB-207ENST00000506679 LAMP2P13473 410 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 TNFAIP3P21580 790 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 CHMP24386 653 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 TKTP29401 623 aaKnown RBP2.92□□□□□ -1.94
GYPB-207ENST00000506679 SSTR2P30874 369 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 CCKBRP32239 447 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 PBX3P40426 434 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 EIF2S3P41091 472 aaKnown RBP2.92□□□□□ -1.94
GYPB-207ENST00000506679 DCAF7P61962 342 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 CSTF3Q12996 717 aaKnown RBP2.92□□□□□ -1.94
GYPB-207ENST00000506679 MYBPHQ13203 477 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 NAE1Q13564 534 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 DRAP1Q14919 205 aaPredicted RBP2.92□□□□□ -1.94
GYPB-207ENST00000506679 OASLQ15646 514 aaKnown RBP2.92□□□□□ -1.94
GYPB-207ENST00000506679 ZNF585BQ52M93 769 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms