RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 USP45Q70EL2 814 aa18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 PIP4P1Q86T03 277 aa18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 CDKL3Q8IVW4 592 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 LPCAT1Q8NF37 534 aa18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 COQ10AQ96MF6 247 aa18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 ELF4Q99607 663 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 TM7SF3Q9NS93 570 aa18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 KLHL8Q9P2G9 620 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 F5H423 210 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-216ENST00000506537 LZTS3O60299 673 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-216ENST00000506537 RECQL5O94762 991 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-216ENST00000506537 CA4P22748 312 aa18.29■□□□□ 0.52
PDLIM7-216ENST00000506537 CCT8P50990 548 aa18.29■□□□□ 0.52
PDLIM7-216ENST00000506537 SLC14A2Q15849 920 aa18.29■□□□□ 0.52
PDLIM7-216ENST00000506537 SEL1L2Q5TEA6 688 aa18.29■□□□□ 0.52
PDLIM7-216ENST00000506537 HSD11B1LQ7Z5J1 315 aa18.29■□□□□ 0.52
PDLIM7-216ENST00000506537 CBARPQ8N350 705 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-216ENST00000506537 UBE2Q2Q8WVN8 375 aa18.29■□□□□ 0.52
PDLIM7-216ENST00000506537 C1QTNF7Q9BXJ2 289 aa18.29■□□□□ 0.52
PDLIM7-216ENST00000506537 CARD9Q9H257 536 aa18.29■□□□□ 0.52
PDLIM7-216ENST00000506537 ERVMER34-1Q9H9K5 563 aa18.29■□□□□ 0.52
PDLIM7-216ENST00000506537 CABIN1Q9Y6J0 2220 aa18.29■□□□□ 0.52
PDLIM7-216ENST00000506537 GOLGA6L9A6NEM1 432 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 CAPN8A6NHC0 703 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 GOLGA8CPA6NN73 597 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 MAGEC1O60732 1142 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 CYP2A6P11509 494 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 RABIFP47224 123 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 EPHB1P54762 984 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 RPL26P61254 145 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 SLC14A1Q13336 389 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 GALNT3Q14435 633 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 LRRC14Q15048 493 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 QPCTQ16769 361 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 CRTC1Q6UUV9 634 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 KDELC1Q6UW63 502 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 SLC13A5Q86YT5 568 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 PELI3Q8N2H9 469 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 PLA2G15Q8NCC3 412 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 FAM174AQ8TBP5 190 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 OXNAD1Q96HP4 312 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 VAT1Q99536 393 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 GORASP1Q9BQQ3 440 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 USP29Q9HBJ7 922 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 UBP1Q9NZI7 540 aa18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 RPL26L1Q9UNX3 145 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 CNOT1A5YKK6 2376 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-216ENST00000506537 KCNN4O15554 427 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 PCCBP05166 539 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 EPHA8P29322 1005 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 FZD2Q14332 565 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 ACOX1Q15067 660 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 PCSK7Q16549 785 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 LRRC66Q68CR7 880 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 DENND2CQ68D51 928 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 DARS2Q6PI48 645 aaKnown RBP18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 RFLNAQ6ZTI6 216 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 PID1Q7Z2X4 250 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 KDELC2Q7Z4H8 507 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 TTC13Q8NBP0 860 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 DEFB124Q8NES8 71 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 SLC35B2Q8TB61 432 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 ATG4AQ8WYN0 398 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 CAMK1GQ96NX5 476 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 FCRL5Q96RD9 977 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 LYSMD1Q96S90 227 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 GBA3Q9H227 469 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 TRHDEQ9UKU6 1024 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 BTBD3Q9Y2F9 522 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 PCDHGB2Q9Y5G2 931 aa18.27■□□□□ 0.52
PDLIM7-216ENST00000506537 SPTY2D1-AS1A0A0U1RR47 76 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 USP27XA6NNY8 438 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 PSMD11O00231 422 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 GIPC1O14908 333 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 SH3BP5O60239 455 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 PCDHGA12O60330 932 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 DFNA5O60443 496 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 PMPCBO75439 489 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 C1SP09871 688 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 CSRP1P21291 193 aaKnown RBP18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 NFKBIAP25963 317 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 ETV3P41162 512 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 RXRGP48443 463 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 CDK18Q07002 472 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 PDE1CQ14123 709 aaPredicted RBP18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 ARHGEF7Q14155 803 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 CDKN3Q16667 212 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 DBX2Q6ZNG2 339 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 DGLUCYQ7Z3D6 616 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 GATAD2AQ86YP4 633 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 NAXDQ8IW45 347 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 OXR1Q8N573 874 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 DTD2Q96FN9 168 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 TRMT1Q9NXH9 659 aaKnown RBP18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 FAM153AQ9UHL3 310 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 RSPH14Q9UHP6 348 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 DNPEPQ9ULA0 475 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 PNMA8BQ9ULN7 279 aaPredicted RBP18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 PYCARDQ9ULZ3 195 aa18.26■□□□□ 0.51
PDLIM7-216ENST00000506537 ANKRD66B4E2M5 251 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms