RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 CCDC177Q9NQR7 707 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 ASB6Q9NWX5 421 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 PLK2Q9NYY3 685 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 ABI3Q9P2A4 366 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 FBXL17Q9UF56 701 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 CNOT8Q9UFF9 292 aaKnown RBP3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 SERGEFQ9UGK8 458 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 TLK1Q9UKI8 766 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 NENFQ9UMX5 172 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 LAMP3Q9UQV4 416 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZNF711Q9Y462 761 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 E9PCH4 1651 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 AOX1Q06278 1338 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 SRCAPQ6ZRS2 3230 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 AHDC1Q5TGY3 1603 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 IQGAP3Q86VI3 1631 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 XRN1Q8IZH2 1706 aaKnown RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 FAM237AA0A1B0GTK4 181 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 FAM170AA1A519 330 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 DDTLA6NHG4 134 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 FAM90A8PA6NJQ4 464 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 RHODO00212 210 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 CTDSP2O14595 271 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 TP73O15350 636 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 ADAM20O43506 726 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 HCRTR2O43614 444 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 GCP02774 474 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 RPN1P04843 607 aaKnown RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 FAM90A13PP0C7W8 464 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 FAM90A24PP0C7X0 464 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 SELLP14151 372 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZNF182P17025 639 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 EDN2P20800 178 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 BMP5P22003 454 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 EPHB2P29323 1055 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 HOXA13P31271 388 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 RYKP34925 604 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 PIK3CAP42336 1068 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 SLC15A1P46059 708 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 GPR12P47775 334 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 HSD17B4P51659 736 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 TERF1P54274 439 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 MFAP4P55083 255 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 PSMC6P62333 389 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 YPEL5P62699 121 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 TUBA4AP68366 448 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 TFAP4Q01664 338 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 ROR1Q01973 937 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 AIMP1Q12904 312 aaKnown RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 STIM1Q13586 685 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 PCLAFQ15004 111 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 PLCB4Q15147 1175 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 SHBQ15464 509 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 NAB2Q15742 525 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 PROSER3Q2NL68 480 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 ALG11Q2TAA5 492 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 COL28A1Q2UY09 1125 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 TTC39AQ5SRH9 613 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 NCAPH2Q6IBW4 605 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 KIAA0930Q6ICG6 404 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 CRELD2Q6UXH1 353 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZNF627Q7L945 461 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 ADGRA1Q86SQ6 560 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 SERPINA11Q86U17 422 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 TRIM74Q86UV6 250 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 TRIM73Q86UV7 250 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 DNAAF5Q86Y56 855 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZDHHC23Q8IYP9 409 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 SYT2Q8N9I0 419 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 PRPF31Q8WWY3 499 aaKnown RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 ATOH1Q92858 354 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 MAP4K1Q92918 833 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZKSCAN4Q969J2 545 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 SLC22A18Q96BI1 424 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 RNF183Q96D59 192 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 ARHGEF26Q96DR7 871 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZC3HAV1LQ96H79 300 aaKnown RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 PIMREGQ9BSJ6 248 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZNF747Q9BV97 191 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 APOL6Q9BWW8 343 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 SIL1Q9H173 461 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 OR10A4Q9H209 315 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 KLK15Q9H2R5 256 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 PDZD7Q9H5P4 517 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 RANGRFQ9HD47 186 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 WDR6Q9NNW5 1121 aaKnown RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 BPIFA1Q9NP55 256 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 TAB2Q9NYJ8 693 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 OGFRQ9NZT2 677 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 MARCH4Q9P2E8 410 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 CPSF2Q9P2I0 782 aaKnown RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 LSM4Q9Y4Z0 139 aaKnown RBP3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 FAM169AQ9Y6X4 670 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 AFF2P51816 1311 aa3.34□□□□□ -1.87
TRAPPC11-205ENST00000506426 ADGRL3Q9HAR2 1447 aa3.34□□□□□ -1.88
TRAPPC11-205ENST00000506426 CLTCL1P53675 1640 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 MYO5BQ9ULV0 1848 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 TRBV5-7A0A0A0MS05 114 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 GLOD5A6NK44 160 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms