RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 AP3B1O00203 1094 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 CACNB4O00305 520 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 BIN1O00499 593 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 OGG1O15527 345 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 ST8SIA3O43173 380 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 SPRY2O43597 315 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 PMPCBO75439 489 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 AKAP3O75969 853 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 DIRAS3O95661 229 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 TFP02787 698 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 KLKB1P03952 638 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 ENO1P06733 434 aaKnown RBP3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 HEXAP06865 529 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 CYC1P08574 325 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 FAM86B2P0C5J1 330 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 CCDC159P0C7I6 412 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 TPBGLP0DKB5 382 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 ITGAXP20702 1163 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 TACR2P21452 398 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 GPTP24298 496 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 RPA1P27694 616 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 TYK2P29597 1187 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 MCM5P33992 734 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 ADRA1BP35368 520 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 SLC16A2P36021 539 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 KHKP50053 298 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 ARSFP54793 590 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 ADAM8P78325 824 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 NHLH2Q02577 135 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 HGFACQ04756 655 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 CETN1Q12798 172 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 SGCGQ13326 291 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 TMED1Q13445 227 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 DYRK1AQ13627 763 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 RPE65Q16518 533 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 UGP2Q16851 508 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 GEN1Q17RS7 908 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 CBWD6Q4V339 395 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 USP39Q53GS9 565 aaKnown RBP3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 CBWD3Q5JTY5 395 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 DAB2IPQ5VWQ8 1189 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 TMEM268Q5VZI3 342 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 TMEM198Q66K66 360 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 MCTP1Q6DN14 999 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 LRRC8EQ6NSJ5 796 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 DPY19L2P1Q6NXN4 242 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 KYAT3Q6YP21 454 aaKnown RBP3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 RBM43Q6ZSC3 357 aaKnown RBP3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 DET1Q7L5Y6 550 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 HAUS6Q7Z4H7 955 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 FBXO39Q8N4B4 442 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 UXS1Q8NBZ7 420 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 FBXO15Q8NCQ5 510 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 B3GALNT2Q8NCR0 500 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 CCNYQ8ND76 341 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 NCOA7Q8NI08 942 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 FEZF2Q8TBJ5 459 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 BRSK1Q8TDC3 778 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 AKAP1Q92667 903 aaKnown RBP eCLIP3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 LRRC59Q96AG4 307 aaKnown RBP3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 AJUBAQ96IF1 538 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 KIRREL1Q96J84 757 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 RMDN2Q96LZ7 410 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 HARBI1Q96MB7 349 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 GPR78Q96P69 363 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 DIRC2Q96SL1 478 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 SPATA25Q9BR10 227 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 CRACR2AQ9BSW2 395 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 INPP5KQ9BT40 448 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 THUMPD2Q9BTF0 503 aaKnown RBP3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 GPR88Q9GZN0 384 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 NT5C3AQ9H0P0 336 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 MMP27Q9H306 513 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 DENND2DQ9H6A0 471 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 NOL11Q9H8H0 719 aaKnown RBP3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 CHMP1AQ9HD42 196 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 TUFT1Q9NNX1 390 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 DNAJC17Q9NVM6 304 aaKnown RBP3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 TMEM161AQ9NX61 479 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 CYP39A1Q9NYL5 469 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 COX16Q9P0S2 106 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 ABI3Q9P2A4 366 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 NLKQ9UBE8 527 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 SPASTQ9UBP0 616 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 SNX7Q9UNH6 387 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 B3GNT3Q9Y2A9 372 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 REXO2Q9Y3B8 237 aaKnown RBP3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 PMF1-BGLAPU3KQ54 211 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 SPATA31A3Q5VYP0 1347 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 PRAMEF33A0A0G2JMD5 474 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 TCRBV7S3A2A0A539 114 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 LNP1A1A4G5 178 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 C1orf226A1L170 272 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 TARSL2A2RTX5 802 aaKnown RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 SLC9B1P1A6NJY1 282 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 MAGEB17A8MXT2 336 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 CLIC2O15247 247 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 TMPRSS11DO60235 418 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 CDC14BO60729 498 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 PRAMEF10O60809 474 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms