RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 BCKDHBP21953 392 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 NPY2RP49146 381 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 CAV1Q03135 178 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 ARMC12Q5T9G4 340 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 WDR93Q6P2C0 686 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 KYAT3Q6YP21 454 aaKnown RBP8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 GCNT7Q6ZNI0 430 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 AGAP3Q96P47 875 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 ZDHHC6Q9H6R6 413 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 ANKZF1Q9H8Y5 726 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 CAPN10Q9HC96 672 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 ZNF711Q9Y462 761 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 FAM86C2PA6NEL3 165 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 SYNCRIPO60506 623 aaKnown RBP8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 ADARP55265 1226 aaKnown RBP8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 KIAA1024LP59773 190 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 PPP2CBP62714 309 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 PPP2CAP67775 309 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 BNC1Q01954 994 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 HORMAD1Q86X24 394 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 CCNYQ8ND76 341 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 SNF8Q96H20 258 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 SERPINB12Q96P63 405 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 ADGRE3Q9BY15 652 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 TM6SF2Q9BZW4 377 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 SPATA6Q9NWH7 488 aaPredicted RBP8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 SOX13Q9UN79 622 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 CTIFO43310 598 aaKnown RBP8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 WISP3O95389 354 aaPredicted RBP8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 CD9P21926 228 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 PSMD8P48556 350 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 PACS1Q6VY07 963 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 FLCNQ8NFG4 579 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 EPB41L4BQ9H329 900 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 PCDHGC4Q9Y5F7 938 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 ZCWPW2A0A1B0GU75 182 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 A0A1W2PPC4 97 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 RNASEH1O60930 286 aaKnown RBP8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 ACSL1P33121 698 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 CLCNKAP51800 687 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 RPS21P63220 83 aaKnown RBP8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 PEX6Q13608 980 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 ZNF423Q2M1K9 1284 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 TYSND1Q2T9J0 566 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 EXOC2Q96KP1 924 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 LRRC1Q9BTT6 524 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 CEP41Q9BYV8 373 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 RAD18Q9NS91 495 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 FAM237BA0A1B0GVD1 139 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 LAMTOR5O43504 91 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 SGTAO43765 313 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 AGTP01019 485 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 UGT2B4P06133 528 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 PAFAH1B1P43034 410 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 SPINT3P49223 89 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 SCNN1BP51168 640 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 GBX1Q14549 363 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 NAPEPLDQ6IQ20 393 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 PID1Q7Z2X4 250 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 HSD11B1LQ7Z5J1 315 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 XAB2Q9HCS7 855 aaKnown RBP8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 LATS2Q9NRM7 1088 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 KLHL8Q9P2G9 620 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 B4GALT6Q9UBX8 382 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 ZNF148Q9UQR1 794 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 TCAF1Q9Y4C2 921 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 A0A1W2PP55 124 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 LZTS3O60299 673 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 DNTTP04053 509 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 GSTA2P09210 222 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 CD27P26842 260 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 FNTBP49356 437 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 RAD51Q06609 339 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 CDH17Q12864 832 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 TTC31Q49AM3 519 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 MSS51Q4VC12 460 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 SLC23A3Q6PIS1 610 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 HDDC3Q8N4P3 179 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 MFSD1Q9H3U5 465 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 FBXL12Q9NXK8 326 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 EFCAB8A8MWE9 144 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 AURKAO14965 403 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 SEMA4FO95754 770 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 GAS8O95995 478 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 CYP2A6P11509 494 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 CA5AP35218 305 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 PDE1BQ01064 536 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 CCDC15Q0P6D6 951 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 SNX1Q13596 522 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 FNBP1LQ5T0N5 605 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 MAATS1Q7Z4T9 603 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 BBOF1Q8ND07 529 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 BMFQ96LC9 184 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 KRT12Q99456 494 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 FERMT1Q9BQL6 677 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 IL22Q9GZX6 179 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 MOCS1Q9NZB8 636 aa8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE2-208ENST00000505065 CACNA1IQ9P0X4 2223 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms