RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 PRKAG1P54619 331 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 ABHD18Q0P651 414 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 SPP2Q13103 211 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 ATP1A4Q13733 1029 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 ZSCAN26Q16670 478 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 RIPPLY2Q5TAB7 128 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 DEGS2Q6QHC5 323 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 IQCHQ86VS3 1027 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 LDHDQ86WU2 507 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 MINDY1Q8N5J2 469 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 RNF10Q8N5U6 811 aaKnown RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 FSIP1Q8NA03 581 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 TRIM58Q8NG06 486 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 EXOC6Q8TAG9 804 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 BPIFB1Q8TDL5 484 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 ELP5Q8TE02 316 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 STARD8Q92502 1023 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 WDR92Q96MX6 357 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 PLEKHG4BQ96PX9 1271 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 USP28Q96RU2 1077 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 GAL3ST1Q99999 423 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 CDK19Q9BWU1 502 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 BICC1Q9H694 974 aaKnown RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 CYP3A43Q9HB55 503 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 DONSONQ9NYP3 566 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 CRNNQ9UBG3 495 aaPredicted RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 ATP6V1HQ9UI12 483 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 ITGA11Q9UKX5 1188 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 VPS4AQ9UN37 437 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 TRIM49BA6NDI0 452 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 ASB14A6NK59 587 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 HDAC3O15379 428 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 ZWINTO95229 277 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 KRT14P02533 472 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 CLUP10909 449 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 MGAT1P26572 445 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 RFTN1Q14699 578 aaPredicted RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 CDC73Q6P1J9 531 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 BRAT1Q6PJG6 821 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 RNF111Q6ZNA4 994 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 RNF144BQ7Z419 303 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 TCAIMQ8N3R3 496 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 METTL25Q8N6Q8 603 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 PDPRQ8NCN5 879 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 ACDQ96AP0 544 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 PIWIL1Q96J94 861 aaKnown RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 NUDCD1Q96RS6 583 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 IFIH1Q9BYX4 1025 aaKnown RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 RPF1Q9H9Y2 349 aaKnown RBP5.28□□□□□ -1.56
NIPBL-204ENST00000504430 SPACA1Q9HBV2 294 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 EPB41L5Q9HCM4 733 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 OLAHQ9NV23 265 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 PANK4Q9NVE7 773 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 NDUFA13Q9P0J0 144 aa5.28□□□□□ -1.56
NIPBL-204ENST00000504430 A0A1W2PR77 199 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 TTC26A0AVF1 554 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 NPIPB13A6NJU9 1138 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 NPIPB4C9JG80 1138 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 EIF3DO15371 548 aaKnown RBP eCLIP5.27□□□□□ -1.57
NIPBL-204ENST00000504430 MFN2O95140 757 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 CYP2F1P24903 491 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 ADORA2AP29274 412 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 CXCR5P32302 372 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 ADORA2A-AS1P86434 159 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 LCP2Q13094 533 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 RTP5Q14D33 572 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 LY6KQ17RY6 165 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 IFI44LQ53G44 452 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 RALGPS1Q5JS13 557 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 C10orf120Q5SQS8 335 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 ANKRD34AQ69YU3 496 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 PDPK2PQ6A1A2 396 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 TEPPQ6URK8 271 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 TRIM72Q6ZMU5 477 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 BMP8AQ7Z5Y6 402 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 FBXO11Q86XK2 927 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 STPG3Q8N7X2 389 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 C17orf47Q8NEP4 570 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 CFAP61Q8NHU2 1237 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 WDR60Q8WVS4 1066 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 LIPHQ8WWY8 451 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 EDARADDQ8WWZ3 215 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 INPP5DQ92835 1189 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 NT5C3BQ969T7 300 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 PABPC5Q96DU9 382 aaKnown RBP5.27□□□□□ -1.57
NIPBL-204ENST00000504430 ASCL2Q99929 193 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 TRIM62Q9BVG3 475 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 HAPLN2Q9GZV7 340 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 GSTO2Q9H4Y5 243 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 CNOT10Q9H9A5 744 aaKnown RBP5.27□□□□□ -1.57
NIPBL-204ENST00000504430 LY9Q9HBG7 655 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 RRP7BPQ9NSQ0 103 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 IL1RAPL1Q9NZN1 696 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 DNPEPQ9ULA0 475 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 PLAGL1Q9UM63 463 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 GAKO14976 1311 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 PNPLA7Q6ZV29 1317 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 ZNF716A6NP11 495 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 ZNF839A8K0R7 811 aa5.27□□□□□ -1.57
NIPBL-204ENST00000504430 CIDEAO60543 219 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms