RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ZFYP08048 801 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 MMP2P08253 660 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TBC1D3HP0C7X1 549 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 GPR89BP0CG08 455 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 PDGFRAP16234 1089 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 HK1P19367 917 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 KCNA3P22001 575 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 KCNA5P22460 613 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 MGAT1P26572 445 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 HNF1BP35680 557 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 PBX1P40424 430 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 ARL1P40616 181 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 ACAA2P42765 397 aaKnown RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 KCNJ1P48048 391 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 PITPNBP48739 271 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 PGDP52209 483 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 DGKEP52429 567 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 ACTR1AP61163 376 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 RPL15P61313 204 aaKnown RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TGFB2P61812 414 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 ARHGAP8P85298 464 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 BEX3Q00994 111 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 CAP1Q01518 475 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 CYP4A11Q02928 519 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 NIPAL4Q0D2K0 466 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 MRPL49Q13405 166 aaKnown RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 ITPK1Q13572 414 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 NFYCQ13952 458 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 AAK1Q2M2I8 961 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 ASTE1Q2TB18 679 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 DPCR1Q3MIW9 517 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 USP39Q53GS9 565 aaKnown RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 BOLA3Q53S33 107 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TBC1D3GQ6DHY5 549 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TBC1D3CQ6IPX1 549 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 NAPEPLDQ6IQ20 393 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TMEM81Q6P7N7 255 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 SLC46A3Q7Z3Q1 461 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 DZIP1Q86YF9 867 aaKnown RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TICAM1Q8IUC6 712 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TBC1D3Q8IZP1 549 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 FITM2Q8N6M3 262 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TC2NQ8N9U0 490 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 IQUBQ8NA54 791 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 KDM1BQ8NB78 822 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 MBD3L2Q8NHZ7 208 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TBC1D15Q8TC07 691 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TMEM171Q8WVE6 324 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 CDCA5Q96FF9 252 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 LRIG1Q96JA1 1093 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 CLMNQ96JQ2 1002 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 SPATA13Q96N96 652 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 KLHL32Q96NJ5 620 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 MAP7D2Q96T17 732 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 RUFY1Q96T51 708 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 FERMT1Q9BQL6 677 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 PAAF1Q9BRP4 392 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 MLPHQ9BV36 600 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 NUP85Q9BW27 656 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TRIM31Q9BZY9 425 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 RWDD1Q9H446 243 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 MMRN2Q9H8L6 949 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 MSL2Q9HCI7 577 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 PDE11AQ9HCR9 933 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 ARHGEF38Q9NXL2 777 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 PEMTQ9UBM1 199 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 CDH22Q9UJ99 828 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 OSGIN2Q9Y236 505 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TAF1LQ8IZX4 1826 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TUBGCP6Q96RT7 1819 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 COL5A3P25940 1745 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 PALLDQ8WX93 1383 aa4.4□□□□□ -1.7
HMGB1P21-201ENST00000502313 SIPA1L3O60292 1781 aaPredicted RBP4.4□□□□□ -1.7
HMGB1P21-201ENST00000502313 UBR2Q8IWV8 1755 aa4.4□□□□□ -1.7
HMGB1P21-201ENST00000502313 KRTAP9-6A0A140TA67 174 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 A0A1B0GTL3 188 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 TCRBV21S2A2A0A5A6 115 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 CDHR4A6H8M9 788 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 A6NL46 340 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 CDRT15L2A8MXV6 281 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 EIF3CLB5ME19 914 aaKnown RBP4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 GRM8O00222 908 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 CA12O43570 354 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 MFAP3LO75121 409 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 KIAA0754O94854 1291 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 LETM1O95202 739 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 ETS1P14921 441 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 TAL1P17542 331 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 CASTP20810 708 aaKnown RBP4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 DRD1P21728 446 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 HTR7P34969 479 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 GSTM5P46439 218 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 ZNF134P52741 427 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 PRKAG1P54619 331 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 PDE1AP54750 535 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 GMFBP60983 142 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 ARF5P84085 180 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 PIGFQ07326 219 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 IKQ13123 557 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 RPS6KA1Q15418 735 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms