RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 PCDHB11Q9Y5F2 797 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 A0A1W2PQM1 296 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 TMEM202A6NGA9 273 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 LRRC10BA6NIK2 292 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 DFFAO00273 331 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 ZW10O43264 779 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 RNF8O76064 485 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 PRKCGP05129 697 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 PSMA2P25787 234 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 SCNN1BP51168 640 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 KIAA1024LP59773 190 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 ACOX1Q15067 660 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 TSR1Q2NL82 804 aaKnown RBP12.08□□□□□ -0.48
CNOT4-211ENST00000498534 CERCAMQ5T4B2 595 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 AFMIDQ63HM1 303 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 LIPIQ6XZB0 460 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 PLA2G15Q8NCC3 412 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 OR1E3Q8WZA6 343 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 FUBP1Q96AE4 644 aaKnown RBP12.08□□□□□ -0.48
CNOT4-211ENST00000498534 ERGIC2Q96RQ1 377 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 CMKLR1Q99788 373 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 SEMA4CQ9C0C4 833 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 CYP4F12Q9HCS2 524 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 ANO10Q9NW15 660 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 GPATCH2LQ9NWQ4 482 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 KCTD5Q9NXV2 234 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 AKAP7Q9P0M2 348 aaPredicted RBP12.08□□□□□ -0.48
CNOT4-211ENST00000498534 PISDQ9UG56 409 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 PCSK1NQ9UHG2 260 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 COL27A1Q8IZC6 1860 aaPredicted RBP12.08□□□□□ -0.48
CNOT4-211ENST00000498534 LRRK1Q38SD2 2015 aa12.08□□□□□ -0.48
CNOT4-211ENST00000498534 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.07□□□□□ -0.48
CNOT4-211ENST00000498534 A0A1W2PQ67 120 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 A8MX80 341 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 TEX33O43247 280 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 NUDT21O43809 227 aaKnown RBP12.07□□□□□ -0.48
CNOT4-211ENST00000498534 PRPSAP2O60256 369 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 HGFP14210 728 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 NFKBIAP25963 317 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 TRIM23P36406 574 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 ZNF135P52742 658 aaPredicted RBP12.07□□□□□ -0.48
CNOT4-211ENST00000498534 AP1S1P61966 158 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 MYL5Q02045 173 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 IL10RBQ08334 325 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 MAMLD1Q13495 774 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 C14orf28Q4W4Y0 310 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 PPP6R3Q5H9R7 873 aaPredicted RBP12.07□□□□□ -0.48
CNOT4-211ENST00000498534 TMEM164Q5U3C3 297 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 PNCKQ6P2M8 343 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 RFX8Q6ZV50 586 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 DPPA4Q7L190 304 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 PIM3Q86V86 326 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 ZSWIM9Q86XI8 627 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 PSTKQ8IV42 348 aaKnown RBP12.07□□□□□ -0.48
CNOT4-211ENST00000498534 LZTR1Q8N653 840 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 ZSCAN1Q8NBB4 408 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 KIAA1524Q8TCG1 905 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 ECHDC3Q96DC8 303 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 SGF29Q96ES7 293 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 PDXPQ96GD0 296 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 ARHGAP9Q9BRR9 750 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 TMEM168Q9H0V1 697 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 WDR26Q9H7D7 661 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 FGF22Q9HCT0 170 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 MRPL40Q9NQ50 206 aaKnown RBP12.07□□□□□ -0.48
CNOT4-211ENST00000498534 SEPT3Q9UH03 358 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 ACSL6Q9UKU0 697 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 LOXL2Q9Y4K0 774 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 AHCTF1Q8WYP5 2266 aa12.07□□□□□ -0.48
CNOT4-211ENST00000498534 TMCO5BA8MYB1 307 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 B4DGG1 531 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 EFSO43281 561 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 NOBOXO60393 691 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 LIPCP11150 499 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 ERCC2P18074 760 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 RGRP47804 291 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 HCAR3P49019 387 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 OGDHQ02218 1023 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 KCNC4Q03721 635 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 ZFP36L1Q07352 338 aaKnown RBP12.06□□□□□ -0.48
CNOT4-211ENST00000498534 RALGDSQ12967 914 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 BIRC2Q13490 618 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 PEX6Q13608 980 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 TGIF1Q15583 401 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 MANEAQ5SRI9 462 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 PHF19Q5T6S3 580 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 TMCO4Q5TGY1 634 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 SPECC1LQ69YQ0 1117 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 NYAP1Q6ZVC0 841 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 IRF2BP2Q7Z5L9 587 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 SPRED1Q7Z699 444 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 ZNF599Q96NL3 588 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 PSKH2Q96QS6 385 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 FAM117AQ9C073 453 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 PHPT1Q9NRX4 125 aaPredicted RBP12.06□□□□□ -0.48
CNOT4-211ENST00000498534 LMBRD1Q9NUN5 540 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 HEMK1Q9Y5R4 338 aaPredicted RBP12.06□□□□□ -0.48
CNOT4-211ENST00000498534 RNF215Q9Y6U7 377 aa12.06□□□□□ -0.48
CNOT4-211ENST00000498534 PRSS38A1L453 326 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 TMEM191CA6NGB0 347 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms