RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 CNPY3Q9BT09 278 aa13.71□□□□□ -0.21
SHANK2-217ENST00000498519 CINPQ9BW66 212 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-217ENST00000498519 ASPSCR1Q9BZE9 553 aa13.71□□□□□ -0.21
SHANK2-217ENST00000498519 KLC2Q9H0B6 622 aa13.71□□□□□ -0.21
SHANK2-217ENST00000498519 TMEM168Q9H0V1 697 aa13.71□□□□□ -0.21
SHANK2-217ENST00000498519 LRRC19Q9H756 370 aa13.71□□□□□ -0.21
SHANK2-217ENST00000498519 PDFQ9HBH1 243 aa13.71□□□□□ -0.21
SHANK2-217ENST00000498519 CYP4F12Q9HCS2 524 aa13.71□□□□□ -0.21
SHANK2-217ENST00000498519 FGF22Q9HCT0 170 aa13.71□□□□□ -0.21
SHANK2-217ENST00000498519 PHPT1Q9NRX4 125 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-217ENST00000498519 TRNAU1APQ9NX07 287 aaKnown RBP13.71□□□□□ -0.21
SHANK2-217ENST00000498519 FOXJ2Q9P0K8 574 aa13.71□□□□□ -0.21
SHANK2-217ENST00000498519 MOSPD1Q9UJG1 213 aa13.71□□□□□ -0.21
SHANK2-217ENST00000498519 TUBD1Q9UJT1 453 aa13.71□□□□□ -0.21
SHANK2-217ENST00000498519 PCDHGA3Q9Y5H0 932 aa13.71□□□□□ -0.21
SHANK2-217ENST00000498519 NAV2Q8IVL1 2488 aa13.71□□□□□ -0.21
SHANK2-217ENST00000498519 UBR5O95071 2799 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-217ENST00000498519 PRSS38A1L453 326 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 C9orf172C9J069 976 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 DAPK3O43293 454 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 BUB1BO60566 1050 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-217ENST00000498519 CCDC172P0C7W6 258 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 MYCLP1P12525 358 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-217ENST00000498519 CCNB1P14635 433 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 CHRNB2P17787 502 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 ZNF135P52742 658 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-217ENST00000498519 AP1S1P61966 158 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 B4GALNT1Q00973 533 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 NR1D2Q14995 579 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 CLEC16AQ2KHT3 1053 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 DPCR1Q3MIW9 517 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 HSP90AA4PQ58FG1 418 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 TMCO4Q5TGY1 634 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 PNCKQ6P2M8 343 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 DCUN1D2Q6PH85 259 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 LIPIQ6XZB0 460 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 ZNF438Q7Z4V0 828 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 VASH2Q86V25 355 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 PLA2G15Q8NCC3 412 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 AGBL5Q8NDL9 886 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 ECHDC3Q96DC8 303 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 CATSPER2Q96P56 530 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 MAGEB5Q9BZ81 275 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 TRIM4Q9C037 500 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 CDH19Q9H159 772 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 GANQ9H2C0 597 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 CARS2Q9HA77 564 aaKnown RBP13.7□□□□□ -0.22
SHANK2-217ENST00000498519 FAM207AQ9NSI2 230 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-217ENST00000498519 BOD1L1Q8NFC6 3051 aa13.7□□□□□ -0.22
SHANK2-217ENST00000498519 DOCK9Q9BZ29 2069 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.69□□□□□ -0.22
SHANK2-217ENST00000498519 J3KR12 359 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 CCP110O43303 1012 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 NTRK1P04629 796 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 KRT10P13645 584 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 ALDH4A1P30038 563 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 CSTF2P33240 577 aaKnown RBP eCLIP13.69□□□□□ -0.22
SHANK2-217ENST00000498519 MAN1A1P33908 653 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 JAM2P57087 298 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 PTP4A2Q12974 167 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 ACOX1Q15067 660 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 AMZ1Q400G9 498 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 C17orf82Q86X59 251 aaPredicted RBP13.69□□□□□ -0.22
SHANK2-217ENST00000498519 IL22RA1Q8N6P7 574 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 NETO2Q8NC67 525 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 ANKRD20A12PQ8NF67 263 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 ZDHHC1Q8WTX9 485 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 SPOCK2Q92563 424 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 MCEEQ96PE7 176 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 EFHD1Q9BUP0 239 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 DDA1Q9BW61 102 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 SEMA6CQ9H3T2 930 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 CLSTN2Q9H4D0 955 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 SP110Q9HB58 689 aa13.69□□□□□ -0.22
SHANK2-217ENST00000498519 MRPL40Q9NQ50 206 aaKnown RBP13.69□□□□□ -0.22
SHANK2-217ENST00000498519 SEPT11Q9NVA2 429 aaKnown RBP13.69□□□□□ -0.22
SHANK2-217ENST00000498519 AHCTF1Q8WYP5 2266 aa13.68□□□□□ -0.22
SHANK2-217ENST00000498519 EEF2KO00418 725 aaKnown RBP13.68□□□□□ -0.22
SHANK2-217ENST00000498519 TEX33O43247 280 aa13.68□□□□□ -0.22
SHANK2-217ENST00000498519 HSPA9P38646 679 aaKnown RBP13.68□□□□□ -0.22
SHANK2-217ENST00000498519 ETV5P41161 510 aa13.68□□□□□ -0.22
SHANK2-217ENST00000498519 CCR10P46092 362 aa13.68□□□□□ -0.22
SHANK2-217ENST00000498519 PAPOLAP51003 745 aaKnown RBP13.68□□□□□ -0.22
SHANK2-217ENST00000498519 RAB15P59190 212 aa13.68□□□□□ -0.22
SHANK2-217ENST00000498519 SQSTM1Q13501 440 aa13.68□□□□□ -0.22
SHANK2-217ENST00000498519 C16orf72Q14CZ0 275 aa13.68□□□□□ -0.22
SHANK2-217ENST00000498519 MON1BQ7L1V2 547 aa13.68□□□□□ -0.22
SHANK2-217ENST00000498519 BBS5Q8N3I7 341 aa13.68□□□□□ -0.22
SHANK2-217ENST00000498519 LZTR1Q8N653 840 aa13.68□□□□□ -0.22
SHANK2-217ENST00000498519 TSEN2Q8NCE0 465 aaKnown RBP13.68□□□□□ -0.22
SHANK2-217ENST00000498519 OR4D9Q8NGE8 314 aa13.68□□□□□ -0.22
SHANK2-217ENST00000498519 NUS1Q96E22 293 aa13.68□□□□□ -0.22
SHANK2-217ENST00000498519 ZNF599Q96NL3 588 aa13.68□□□□□ -0.22
SHANK2-217ENST00000498519 TEFMQ96QE5 360 aaKnown RBP13.68□□□□□ -0.22
SHANK2-217ENST00000498519 RDH14Q9HBH5 336 aa13.68□□□□□ -0.22
SHANK2-217ENST00000498519 NLRC4Q9NPP4 1024 aa13.68□□□□□ -0.22
SHANK2-217ENST00000498519 SAMSN1Q9NSI8 373 aaKnown RBP13.68□□□□□ -0.22
SHANK2-217ENST00000498519 TAAR2Q9P1P5 351 aa13.68□□□□□ -0.22
SHANK2-217ENST00000498519 TLN1Q9Y490 2541 aaKnown RBP13.68□□□□□ -0.22
SHANK2-217ENST00000498519 TDRD6O60522 2096 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms