RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 FUT10Q6P4F1 479 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 BLOC1S2Q6QNY1 142 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 ANO5Q75V66 913 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 SYT13Q7L8C5 426 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 NEK8Q86SG6 692 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 PEG10Q86TG7 708 aaKnown RBP4.19□□□□□ -1.74
USP54-217ENST00000498213 TMPRSS12Q86WS5 348 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 CEP57Q86XR8 500 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 RHPN2Q8IUC4 686 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 TICAM1Q8IUC6 712 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 LRRC71Q8N4P6 559 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 ZNF248Q8NDW4 579 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 MYCBPAPQ8TBZ2 947 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 CEP170P1Q96L14 293 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 LRRC3BQ96PB8 259 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 CLSTN3Q9BQT9 956 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 ADPGKQ9BRR6 497 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 TIPINQ9BVW5 301 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 IL25Q9H293 177 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 KLK15Q9H2R5 256 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 PRDM13Q9H4Q3 707 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 WDCPQ9H6R7 721 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 TRPV4Q9HBA0 871 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 KMT5AQ9NQR1 393 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 ASB6Q9NWX5 421 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 DDX25Q9UHL0 483 aaKnown RBP4.19□□□□□ -1.74
USP54-217ENST00000498213 TPCN1Q9ULQ1 816 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 BTBD3Q9Y2F9 522 aa4.19□□□□□ -1.74
USP54-217ENST00000498213 LUC7L2Q9Y383 392 aaKnown RBP4.19□□□□□ -1.74
USP54-217ENST00000498213 KIF26AQ9ULI4 1882 aaPredicted RBP4.19□□□□□ -1.74
USP54-217ENST00000498213 EML5Q05BV3 1969 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 THADAQ6YHU6 1953 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 NOTCH4Q99466 2003 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 CELSR2Q9HCU4 2923 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 VPS37CA5D8V6 355 aaPredicted RBP4.18□□□□□ -1.74
USP54-217ENST00000498213 ANTXRLA6NF34 631 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 H7C4K7 107 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 DDX39AO00148 427 aaKnown RBP4.18□□□□□ -1.74
USP54-217ENST00000498213 PROM1O43490 865 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 TSPAN1O60635 241 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 VPS4BO75351 444 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 TADA2AO75478 443 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 THP07101 528 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 MYL4P12829 197 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 ZNF37AP17032 561 aaPredicted RBP4.18□□□□□ -1.74
USP54-217ENST00000498213 PDCP20941 246 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 GPD1P21695 349 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 OR1D2P34982 312 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 ARL2P36404 184 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 P2RY2P41231 377 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 MAPK10P53779 464 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 EMC2Q15006 297 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 TEAD2Q15562 447 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 TBC1D25Q3MII6 688 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 LINC00303Q3SY05 128 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 JAKMIP3Q5VZ66 844 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 HAUS3Q68CZ6 603 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 CENPQQ7L2Z9 268 aaPredicted RBP4.18□□□□□ -1.74
USP54-217ENST00000498213 ZBTB8OSQ8IWT0 167 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 TCEAL8Q8IYN2 117 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 BLIDQ8IZY5 108 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 ELMOD1Q8N336 334 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 CPA6Q8N4T0 437 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 SH2D3CQ8N5H7 860 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 CCDC33Q8N5R6 958 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 RNF149Q8NC42 400 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 PSD4Q8NDX1 1056 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 ZNF461Q8TAF7 563 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 TBCKQ8TEA7 893 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 PRPF31Q8WWY3 499 aaKnown RBP4.18□□□□□ -1.74
USP54-217ENST00000498213 PIBF1Q8WXW3 757 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 CEP295NLQ96MC4 621 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 NLRP4Q96MN2 994 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 CCDC43Q96MW1 224 aaKnown RBP4.18□□□□□ -1.74
USP54-217ENST00000498213 DMRTA2Q96SC8 542 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 HSD17B14Q9BPX1 270 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 C1orf43Q9BWL3 253 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 UNC45AQ9H3U1 944 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 TUFT1Q9NNX1 390 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 LMBRD1Q9NUN5 540 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 KCND2Q9NZV8 630 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 CACNG4Q9UBN1 327 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 ITGB1BP2Q9UKP3 347 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 ASB3Q9Y575 518 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 ADAMTS9Q9P2N4 1935 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 COL4A2P08572 1712 aa4.18□□□□□ -1.74
USP54-217ENST00000498213 PDZD2O15018 2839 aa4.17□□□□□ -1.74
USP54-217ENST00000498213 MYH9P35579 1960 aaKnown RBP4.17□□□□□ -1.74
USP54-217ENST00000498213 E9PLN8 166 aa4.17□□□□□ -1.74
USP54-217ENST00000498213 H0YCG3 227 aa4.17□□□□□ -1.74
USP54-217ENST00000498213 INO80B-WBP1J3KQ70 363 aa4.17□□□□□ -1.74
USP54-217ENST00000498213 M0QYG6 137 aa4.17□□□□□ -1.74
USP54-217ENST00000498213 ACKR2O00590 384 aa4.17□□□□□ -1.74
USP54-217ENST00000498213 TNFSF14O43557 240 aa4.17□□□□□ -1.74
USP54-217ENST00000498213 MARCH6O60337 910 aa4.17□□□□□ -1.74
USP54-217ENST00000498213 MOSPD3O75425 235 aa4.17□□□□□ -1.74
USP54-217ENST00000498213 SOAT2O75908 522 aa4.17□□□□□ -1.74
USP54-217ENST00000498213 URI1O94763 535 aaPredicted RBP4.17□□□□□ -1.74
USP54-217ENST00000498213 ZRANB2O95218 330 aaKnown RBP eCLIP4.17□□□□□ -1.74
USP54-217ENST00000498213 RNF224P0DH78 156 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms