RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 LINC00205P59089 165 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 ZBED6P86452 979 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 ST3GAL1Q11201 340 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 GRIK3Q13003 919 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 TWIST1Q15672 202 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 ADIPOQQ15848 244 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 COL28A1Q2UY09 1125 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 MANEAQ5SRI9 462 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 C6orf141Q5SZD1 244 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 MFSD4BQ5TF39 518 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 LRRC8EQ6NSJ5 796 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 PARM1Q6UWI2 310 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 LCTLQ6UWM7 567 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 GLDNQ6ZMI3 551 aaPredicted RBP4.15□□□□□ -1.75
SMC4-225ENST00000497203 COLCA1Q6ZS62 124 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 SLC16A12Q6ZSM3 486 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 ENOSF1Q7L5Y1 443 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 LINGO2Q7L985 606 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 TICAM2Q86XR7 235 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 GPSM1Q86YR5 675 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 C17orf53Q8N3J3 647 aaPredicted RBP4.15□□□□□ -1.75
SMC4-225ENST00000497203 PARP16Q8N5Y8 322 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 C9orf106Q8NAJ2 232 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 BEST2Q8NFU1 509 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 GABPB2Q8TAK5 448 aaPredicted RBP4.15□□□□□ -1.75
SMC4-225ENST00000497203 JAKMIP2Q96AA8 810 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 ERP27Q96DN0 273 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 HARBI1Q96MB7 349 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 ZNF570Q96NI8 536 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 TMEM47Q9BQJ4 181 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 NPFFR1Q9GZQ6 430 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 NKIRAS2Q9NYR9 191 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 NRBP1Q9UHY1 535 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 SRPRBQ9Y5M8 271 aaKnown RBP4.15□□□□□ -1.75
SMC4-225ENST00000497203 MAU2Q9Y6X3 613 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 PASKQ96RG2 1323 aa4.15□□□□□ -1.75
SMC4-225ENST00000497203 TMEM272A0A1B0GTI8 110 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 FAM237AA0A1B0GTK4 181 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 TCERG1O14776 1098 aaKnown RBP4.14□□□□□ -1.75
SMC4-225ENST00000497203 HCRTR2O43614 444 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 KLK8O60259 260 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 EPN2O95208 641 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 OR2C1O95371 312 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 NTN1O95631 604 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 CBSLP0DN79 551 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 TBXAS1P24557 533 aaPredicted RBP4.14□□□□□ -1.75
SMC4-225ENST00000497203 HOXA13P31271 388 aaPredicted RBP4.14□□□□□ -1.75
SMC4-225ENST00000497203 CBSP35520 551 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 ACTN2P35609 894 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 UBA7P41226 1012 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 CXCR3P49682 368 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 DUSP6Q16828 381 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 SOWAHAQ2M3V2 549 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 ZSCAN23Q3MJ62 389 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 CXorf66Q5JRM2 361 aaPredicted RBP4.14□□□□□ -1.75
SMC4-225ENST00000497203 GKAP1Q5VSY0 366 aaPredicted RBP4.14□□□□□ -1.75
SMC4-225ENST00000497203 NUGGCQ68CJ6 796 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 JADE1Q6IE81 842 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 HACE1Q8IYU2 909 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 OR8H2Q8N162 312 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 SCCPDHQ8NBX0 429 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 HUS1BQ8NHY5 278 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 SLC25A28Q96A46 364 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 IFIH1Q9BYX4 1025 aaKnown RBP4.14□□□□□ -1.75
SMC4-225ENST00000497203 RANGRFQ9HD47 186 aaPredicted RBP4.14□□□□□ -1.75
SMC4-225ENST00000497203 ANKEF1Q9NU02 776 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 ERVK-11Q9UQG0 969 aa4.14□□□□□ -1.75
SMC4-225ENST00000497203 IGLV5-39A0A0G2JS06 123 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 CDRT15L2A8MXV6 281 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 AKR1B15C9JRZ8 316 aaPredicted RBP4.13□□□□□ -1.75
SMC4-225ENST00000497203 H3BNX3 289 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 HS6ST1O60243 411 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 RGS11O94810 467 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 NKX2-2O95096 273 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 TOMM40O96008 361 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 RB1P06400 928 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 CLTBP09497 229 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 GPTP24298 496 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 GARSP41250 739 aaKnown RBP4.13□□□□□ -1.75
SMC4-225ENST00000497203 PIK3CAP42336 1068 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 ENTPD1P49961 510 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 RAD23BP54727 409 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 CALD1Q05682 793 aaKnown RBP4.13□□□□□ -1.75
SMC4-225ENST00000497203 LRMPQ12912 555 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 STK4Q13043 487 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 NEDD9Q14511 834 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 NAB2Q15742 525 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 ODF3L2Q3SX64 289 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 SGO1Q5FBB7 561 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 RAB41Q5JT25 222 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 PLEKHA7Q6IQ23 1121 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 MON1BQ7L1V2 547 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 GALNT5Q7Z7M9 940 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 NOXA1Q86UR1 476 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 PIM3Q86V86 326 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 WDR63Q8IWG1 891 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 MB21D2Q8IYB1 491 aaPredicted RBP4.13□□□□□ -1.75
SMC4-225ENST00000497203 RNF168Q8IYW5 571 aaPredicted RBP4.13□□□□□ -1.75
SMC4-225ENST00000497203 ZBTB2Q8N680 514 aa4.13□□□□□ -1.75
SMC4-225ENST00000497203 ENGASEQ8NFI3 743 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms