RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 GFAPP14136 432 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 DGKAP23743 735 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 STX1BP61266 288 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 CHI3L2Q15782 390 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 PDK4Q16654 411 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 RANBP10Q6VN20 620 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 GALNT7Q86SF2 657 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 C10orf67Q8IYJ2 551 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 MDM1Q8TC05 714 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 ATP6V1E2Q96A05 226 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 APOL5Q9BWW9 433 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 NLE1Q9NVX2 485 aaPredicted RBP8.39□□□□□ -1.07
USP54-215ENST00000497106 IL36AQ9UHA7 158 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 ANKRD66B4E2M5 251 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 GPC4O75487 556 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 CRY1Q16526 586 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 KCTD11Q693B1 232 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 FAM47EQ6ZV65 393 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 CNTD1Q8N815 330 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 NAT16Q8N8M0 369 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 KDM1BQ8NB78 822 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 RNF217Q8TC41 542 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 ZNF398Q8TD17 642 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 MFSD3Q96ES6 412 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 PRICKLE1Q96MT3 831 aaPredicted RBP8.39□□□□□ -1.07
USP54-215ENST00000497106 MRPL57Q9BQC6 102 aaKnown RBP8.39□□□□□ -1.07
USP54-215ENST00000497106 ADAM33Q9BZ11 813 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 ASB8Q9H765 288 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 MLXIPLQ9NP71 852 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 ZDHHC4Q9NPG8 344 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 GLYATL1P3A0A0U1RQE8 302 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 PSMC3P17980 439 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 VCLP18206 1134 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 PTGER3P43115 390 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 NRLP54845 237 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 MSLNQ13421 630 aaPredicted RBP8.39□□□□□ -1.07
USP54-215ENST00000497106 CYTH1Q15438 398 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 ZNF77Q15935 545 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 PLPP6Q8IY26 295 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 OR4K2Q8NGD2 314 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 HCAR2Q8TDS4 363 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 MSANTD3Q96H12 275 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 MRPL46Q9H2W6 279 aaKnown RBP8.39□□□□□ -1.07
USP54-215ENST00000497106 C8orf33Q9H7E9 229 aaPredicted RBP8.39□□□□□ -1.07
USP54-215ENST00000497106 POPDC3Q9HBV1 291 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 NCKIPSDQ9NZQ3 722 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 GRXCR1A8MXD5 290 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 CACNG3O60359 315 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 TRIM13O60858 407 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 SHOX2O60902 331 aaPredicted RBP8.39□□□□□ -1.07
USP54-215ENST00000497106 ACADMP11310 421 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 MAP4P27816 1152 aaKnown RBP8.39□□□□□ -1.07
USP54-215ENST00000497106 MZF1P28698 734 aaPredicted RBP8.39□□□□□ -1.07
USP54-215ENST00000497106 KDSRQ06136 332 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 EFTUD2Q15029 972 aaKnown RBP eCLIP8.39□□□□□ -1.07
USP54-215ENST00000497106 ACOX1Q15067 660 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 TEDDM1Q5T9Z0 273 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 RNF135Q8IUD6 432 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 FAM217AQ8IXS0 508 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 CPEB1Q9BZB8 566 aaKnown RBP8.39□□□□□ -1.07
USP54-215ENST00000497106 THAP1Q9NVV9 213 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 HCFC1R1Q9NWW0 138 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 CPSF2Q9P2I0 782 aaKnown RBP8.39□□□□□ -1.07
USP54-215ENST00000497106 VWA7Q9Y334 891 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 FRMPD3Q5JV73 1810 aa8.39□□□□□ -1.07
USP54-215ENST00000497106 RGSL1A5PLK6 1076 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 TRPC5OSA6NMA1 111 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 FTH1P02794 183 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 ESR1P03372 595 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 HOXD9P28356 352 aaPredicted RBP8.38□□□□□ -1.07
USP54-215ENST00000497106 PIK3CGP48736 1102 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 C9orf50Q5SZB4 431 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 ESRP1Q6NXG1 681 aaKnown RBP8.38□□□□□ -1.07
USP54-215ENST00000497106 TPRG1Q6ZUI0 275 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 CCNYL1Q8N7R7 359 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 GRIN3AQ8TCU5 1115 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 EGFL8Q99944 293 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 PBX4Q9BYU1 374 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 ANLNQ9NQW6 1124 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 BCAP29Q9UHQ4 241 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 RNF112Q9ULX5 631 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 MRPS17Q9Y2R5 130 aaKnown RBP8.38□□□□□ -1.07
USP54-215ENST00000497106 PCDHGC4Q9Y5F7 938 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 LOC285095A0A1B0GVY8 99 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 PRMT5O14744 637 aaPredicted RBP8.38□□□□□ -1.07
USP54-215ENST00000497106 KLKB1P03952 638 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 UGT2B4P06133 528 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 GDI1P31150 447 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 VIPR1P32241 457 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 ADRA1AP35348 466 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 GRIA1P42261 906 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 GRIA2P42262 883 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 SLC18A2Q05940 514 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 NIPAL4Q0D2K0 466 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 TRIM67Q6ZTA4 783 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 SNX20Q7Z614 316 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 BANPQ8N9N5 519 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 RAB7BQ96AH8 199 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 C19orf43Q9BQ61 176 aa8.38□□□□□ -1.07
USP54-215ENST00000497106 SPATA16Q9BXB7 569 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms