RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ZSCAN32Q9NX65 697 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 GRHL1Q9NZI5 618 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 GGT7Q9UJ14 662 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 ZNF711Q9Y462 761 aa21.81■■□□□ 1.08
C9orf3-222ENST00000496567 PLXND1Q9Y4D7 1925 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 C1orf232A0A0U1RR37 186 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 A8MX80 341 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 ELFN1P0C7U0 828 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 TPH1P17752 444 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 CNR2P34972 360 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 SEMG2Q02383 582 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 RALGDSQ12967 914 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 PTPRRQ15256 657 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 ZNF534Q76KX8 674 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 GLT6D1Q7Z4J2 308 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 CAND1Q86VP6 1230 aaKnown RBP21.8■■□□□ 1.08
C9orf3-222ENST00000496567 FRMD1Q8N878 549 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 PRRX2Q99811 253 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 WRAP53Q9BUR4 548 aaKnown RBP21.8■■□□□ 1.08
C9orf3-222ENST00000496567 GPR174Q9BXC1 333 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 GPR63Q9BZJ6 419 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 FAM129AQ9BZQ8 928 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 PCED1AQ9H1Q7 454 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 ZFYVE1Q9HBF4 777 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 INVSQ9Y283 1065 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 SPO11Q9Y5K1 396 aa21.8■■□□□ 1.08
C9orf3-222ENST00000496567 ESYT3A0FGR9 886 aa21.79■■□□□ 1.08
C9orf3-222ENST00000496567 PSMD11O00231 422 aa21.79■■□□□ 1.08
C9orf3-222ENST00000496567 MAP3K13O43283 966 aa21.79■■□□□ 1.08
C9orf3-222ENST00000496567 CRTAMO95727 393 aa21.79■■□□□ 1.08
C9orf3-222ENST00000496567 LHCGRP22888 699 aa21.79■■□□□ 1.08
C9orf3-222ENST00000496567 LIG3P49916 1009 aa21.79■■□□□ 1.08
C9orf3-222ENST00000496567 SESN2P58004 480 aaPredicted RBP21.79■■□□□ 1.08
C9orf3-222ENST00000496567 RPS21P63220 83 aaKnown RBP21.79■■□□□ 1.08
C9orf3-222ENST00000496567 MSLNQ13421 630 aaPredicted RBP21.79■■□□□ 1.08
C9orf3-222ENST00000496567 LAMB3Q13751 1172 aa21.79■■□□□ 1.08
C9orf3-222ENST00000496567 LRRC66Q68CR7 880 aa21.79■■□□□ 1.08
C9orf3-222ENST00000496567 LIPIQ6XZB0 460 aa21.79■■□□□ 1.08
C9orf3-222ENST00000496567 TSPAN33Q86UF1 283 aa21.79■■□□□ 1.08
C9orf3-222ENST00000496567 IFT20Q8IY31 132 aa21.79■■□□□ 1.08
C9orf3-222ENST00000496567 GAB3Q8WWW8 586 aa21.79■■□□□ 1.08
C9orf3-222ENST00000496567 ART4Q93070 314 aa21.79■■□□□ 1.08
C9orf3-222ENST00000496567 IL22Q9GZX6 179 aa21.79■■□□□ 1.08
C9orf3-222ENST00000496567 PRR23AA6NEV1 266 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 TP73O15350 636 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 MMP20O60882 483 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 RNGTTO60942 597 aaKnown RBP21.78■■□□□ 1.08
C9orf3-222ENST00000496567 RPP40O75818 363 aaKnown RBP21.78■■□□□ 1.08
C9orf3-222ENST00000496567 CLDN7O95471 211 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 PLTPP55058 493 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 PDE1BQ01064 536 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 POU6F1Q14863 301 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 TAF1AQ15573 450 aaPredicted RBP21.78■■□□□ 1.08
C9orf3-222ENST00000496567 CNGA3Q16281 694 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 CDKN3Q16667 212 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 CERCAMQ5T4B2 595 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 LYSMD3Q7Z3D4 306 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 TRIM69Q86WT6 500 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 HORMAD1Q86X24 394 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 RAVER1Q8IY67 606 aaKnown RBP21.78■■□□□ 1.08
C9orf3-222ENST00000496567 PDIK1LQ8N165 341 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 CADM4Q8NFZ8 388 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.78■■□□□ 1.08
C9orf3-222ENST00000496567 MBD1Q9UIS9 605 aaPredicted RBP21.78■■□□□ 1.08
C9orf3-222ENST00000496567 PCDHGA2Q9Y5H1 932 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 EML5Q05BV3 1969 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 A0A1W2PQU0 124 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 C2orf81A6NN90 581 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 PPFIA2O75334 1257 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 ARL4CP56559 192 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 RPL6Q02878 288 aaKnown RBP21.78■■□□□ 1.08
C9orf3-222ENST00000496567 TRADDQ15628 312 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 ARMC3Q5W041 872 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 TMC3Q7Z5M5 1100 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 ZBTB44Q8NCP5 570 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 UBXN4Q92575 508 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 RANBP9Q96S59 729 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 GDF3Q9NR23 364 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 CUL9Q8IWT3 2517 aa21.78■■□□□ 1.08
C9orf3-222ENST00000496567 HEATR9A2RTY3 570 aa21.77■■□□□ 1.08
C9orf3-222ENST00000496567 SDR42E2A6NKP2 422 aa21.77■■□□□ 1.08
C9orf3-222ENST00000496567 LZTS3O60299 673 aaPredicted RBP21.77■■□□□ 1.08
C9orf3-222ENST00000496567 AVILO75366 819 aa21.77■■□□□ 1.08
C9orf3-222ENST00000496567 TM7SF2O76062 418 aa21.77■■□□□ 1.08
C9orf3-222ENST00000496567 C6P13671 934 aa21.77■■□□□ 1.08
C9orf3-222ENST00000496567 ADRA1DP25100 572 aa21.77■■□□□ 1.08
C9orf3-222ENST00000496567 HMGCLP35914 325 aa21.77■■□□□ 1.08
C9orf3-222ENST00000496567 MAGEA3P43357 314 aa21.77■■□□□ 1.08
C9orf3-222ENST00000496567 CCR5P51681 352 aa21.77■■□□□ 1.08
C9orf3-222ENST00000496567 PTSQ03393 145 aa21.77■■□□□ 1.08
C9orf3-222ENST00000496567 CUL1Q13616 776 aa21.77■■□□□ 1.08
C9orf3-222ENST00000496567 HIF1AQ16665 826 aa21.77■■□□□ 1.08
C9orf3-222ENST00000496567 DNAJC21Q5F1R6 531 aaKnown RBP21.77■■□□□ 1.08
C9orf3-222ENST00000496567 KIAA0895LQ68EN5 471 aa21.77■■□□□ 1.08
C9orf3-222ENST00000496567 CBARPQ8N350 705 aaPredicted RBP21.77■■□□□ 1.08
C9orf3-222ENST00000496567 ZCCHC9Q8N567 271 aaKnown RBP21.77■■□□□ 1.08
C9orf3-222ENST00000496567 FBXO25Q8TCJ0 367 aa21.77■■□□□ 1.08
C9orf3-222ENST00000496567 IFT81Q8WYA0 676 aa21.77■■□□□ 1.08
C9orf3-222ENST00000496567 C6orf106Q9H6K1 298 aaPredicted RBP21.77■■□□□ 1.08
C9orf3-222ENST00000496567 KCTD5Q9NXV2 234 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms