RNA–Protein interactions for RNA: ENST00000494966.1

NIPSNAP1-205, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-205ENST00000494966 BPTFQ12830 3046 aa12.55□□□□□ -0.4
NIPSNAP1-205ENST00000494966 CACNA1GO43497 2377 aa12.55□□□□□ -0.4
NIPSNAP1-205ENST00000494966 SMG1Q96Q15 3661 aaKnown RBP12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 RRP8O43159 456 aaKnown RBP12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 MFSD11O43934 449 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 TNFP01375 233 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 TGM2P21980 687 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 VIPR1P32241 457 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 GARSP41250 739 aaKnown RBP12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 KIAA1024LP59773 190 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 ITKQ08881 620 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 GALNT2Q10471 571 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 TRAF2Q12933 501 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 PDK2Q15119 407 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 ATP13A4Q4VNC1 1196 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 ANKRD20A8PQ5CZ79 823 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 DENND2CQ68D51 928 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 NCBP2-AS2Q69YL0 99 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 LVRNQ6Q4G3 990 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 CRTC1Q6UUV9 634 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 GKN2Q86XP6 184 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 CPNE8Q86YQ8 564 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 SDR16C5Q8N3Y7 309 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 ARL10Q8N8L6 244 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 OR56A4Q8NGH8 313 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 TPCN2Q8NHX9 752 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 FUBP1Q96AE4 644 aaKnown RBP12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 NUS1Q96E22 293 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 PDXPQ96GD0 296 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 ZNF670Q9BS34 389 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 PACSIN1Q9BY11 444 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 POLR1EQ9GZS1 481 aaKnown RBP12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 TSPY26PQ9H489 355 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 WDR26Q9H7D7 661 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 NT5MQ9NPB1 228 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 HAUS2Q9NVX0 235 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 SIRPGQ9P1W8 387 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 GULP1Q9UBP9 304 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 PADI4Q9UM07 663 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 PHTF1Q9UMS5 762 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 TTLL3Q9Y4R7 772 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 DGKBQ9Y6T7 804 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 ADAMTS20P59510 1910 aa12.54□□□□□ -0.4
NIPSNAP1-205ENST00000494966 SHROOM3Q8TF72 1996 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 SSU72P8A0A1W2PR75 194 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 TMEM202A6NGA9 273 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 PDE2AO00408 941 aaPredicted RBP12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 TLX3O43711 291 aaPredicted RBP12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 USP12O75317 370 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 HEXIM1O94992 359 aaKnown RBP12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 PGLSO95336 258 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 TMEM253P0C7T8 217 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 CYP2A6P11509 494 aaPredicted RBP12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 KRT10P13645 584 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 GM2AP17900 193 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 ACTN2P35609 894 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 ABCG1P45844 678 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 ARSEP51690 589 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 ARHGEF7Q14155 803 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 PAFAH1B3Q15102 231 aaKnown RBP12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 CNGA3Q16281 694 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 ASTE1Q2TB18 679 aaPredicted RBP12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 PERM1Q5SV97 790 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 ARMC12Q5T9G4 340 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 TIGD7Q6NT04 549 aaPredicted RBP12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 PNCKQ6P2M8 343 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 LRRC69Q6ZNQ3 347 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 RBM44Q6ZP01 1051 aaKnown RBP12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 NYAP1Q6ZVC0 841 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 USP45Q70EL2 814 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 PDZD3Q86UT5 571 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 VSTM4Q8IW00 320 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 TEX26Q8N6G2 289 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 RNF214Q8ND24 703 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 OR1E3Q8WZA6 343 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 FGF11Q92914 225 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 CCDC42Q96M95 316 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 COQ10AQ96MF6 247 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 SEMA3CQ99985 751 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 SYNDIG1Q9H7V2 258 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 FGF22Q9HCT0 170 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 ABHD10Q9NUJ1 306 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 KCTD5Q9NXV2 234 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 GPR34Q9UPC5 381 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 RAI2Q9Y5P3 530 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 KALRNO60229 2985 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 ASXL3Q9C0F0 2248 aa12.53□□□□□ -0.4
NIPSNAP1-205ENST00000494966 GOLGA6CA6NDK9 693 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 GOLGA6BA6NDN3 693 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 NPIPB15A6NHN6 443 aaPredicted RBP12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 TNFRSF10CO14798 259 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 MATN3O15232 486 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 TCEA3O75764 348 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 MAP3K6O95382 1288 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 MPOP05164 745 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 HOXC4P09017 264 aaPredicted RBP12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 GOLGA6DP0CG33 693 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 MX2P20592 715 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 LHCGRP22888 699 aa12.52□□□□□ -0.41
NIPSNAP1-205ENST00000494966 MAN1A1P33908 653 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms