RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 CAMK2BQ13554 666 aa33.29■■■□□ 2.92
CBX4-203ENST00000494546 PTPRRQ15256 657 aa33.29■■■□□ 2.92
CBX4-203ENST00000494546 ALG11Q2TAA5 492 aa33.29■■■□□ 2.92
CBX4-203ENST00000494546 CCDC13Q8IYE1 715 aa33.29■■■□□ 2.92
CBX4-203ENST00000494546 PLD5Q8N7P1 536 aa33.29■■■□□ 2.92
CBX4-203ENST00000494546 ATL2Q8NHH9 583 aa33.29■■■□□ 2.92
CBX4-203ENST00000494546 RNF25Q96BH1 459 aaPredicted RBP33.29■■■□□ 2.92
CBX4-203ENST00000494546 COQ10AQ96MF6 247 aa33.29■■■□□ 2.92
CBX4-203ENST00000494546 WDR92Q96MX6 357 aa33.29■■■□□ 2.92
CBX4-203ENST00000494546 KLQ9UEF7 1012 aa33.29■■■□□ 2.92
CBX4-203ENST00000494546 U3KQA8 63 aa33.29■■■□□ 2.92
CBX4-203ENST00000494546 ASPMQ8IZT6 3477 aa33.29■■■□□ 2.92
CBX4-203ENST00000494546 KMT2BQ9UMN6 2715 aaPredicted RBP33.29■■■□□ 2.92
CBX4-203ENST00000494546 NPIPB15A6NHN6 443 aaPredicted RBP33.28■■■□□ 2.92
CBX4-203ENST00000494546 ZNF487B1APH4 448 aa33.28■■■□□ 2.92
CBX4-203ENST00000494546 TPP1O14773 563 aa33.28■■■□□ 2.92
CBX4-203ENST00000494546 HLA-DQB2P05538 268 aa33.28■■■□□ 2.92
CBX4-203ENST00000494546 PDHA1P08559 390 aa33.28■■■□□ 2.92
CBX4-203ENST00000494546 TSHRP16473 764 aa33.28■■■□□ 2.92
CBX4-203ENST00000494546 HK3P52790 923 aa33.28■■■□□ 2.92
CBX4-203ENST00000494546 SRP54P61011 504 aaKnown RBP33.28■■■□□ 2.92
CBX4-203ENST00000494546 INSM1Q01101 510 aaPredicted RBP33.28■■■□□ 2.92
CBX4-203ENST00000494546 TARDBPQ13148 414 aaKnown RBP eCLIP33.28■■■□□ 2.92
CBX4-203ENST00000494546 TCEA2Q15560 299 aa33.28■■■□□ 2.92
CBX4-203ENST00000494546 NYAP1Q6ZVC0 841 aa33.28■■■□□ 2.92
CBX4-203ENST00000494546 USP45Q70EL2 814 aa33.28■■■□□ 2.92
CBX4-203ENST00000494546 NUS1Q96E22 293 aa33.28■■■□□ 2.92
CBX4-203ENST00000494546 TBATAQ96M53 351 aa33.28■■■□□ 2.92
CBX4-203ENST00000494546 LGMNQ99538 433 aa33.28■■■□□ 2.92
CBX4-203ENST00000494546 CLPBQ9H078 707 aa33.28■■■□□ 2.92
CBX4-203ENST00000494546 USP29Q9HBJ7 922 aa33.28■■■□□ 2.92
CBX4-203ENST00000494546 DDX56Q9NY93 547 aaKnown RBP33.28■■■□□ 2.92
CBX4-203ENST00000494546 AMACRQ9UHK6 382 aa33.28■■■□□ 2.92
CBX4-203ENST00000494546 GOLGA4Q13439 2230 aaKnown RBP33.27■■■□□ 2.92
CBX4-203ENST00000494546 CACNB4O00305 520 aaPredicted RBP33.27■■■□□ 2.92
CBX4-203ENST00000494546 APOL1O14791 398 aa33.27■■■□□ 2.92
CBX4-203ENST00000494546 RASGRP1O95267 797 aa33.27■■■□□ 2.92
CBX4-203ENST00000494546 ANXA6P08133 673 aa33.27■■■□□ 2.92
CBX4-203ENST00000494546 CTSEP14091 401 aa33.27■■■□□ 2.92
CBX4-203ENST00000494546 CES1P23141 567 aa33.27■■■□□ 2.92
CBX4-203ENST00000494546 SPA17Q15506 151 aa33.27■■■□□ 2.92
CBX4-203ENST00000494546 SLC9A4Q6AI14 798 aa33.27■■■□□ 2.92
CBX4-203ENST00000494546 VSIG1Q86XK7 387 aa33.27■■■□□ 2.92
CBX4-203ENST00000494546 RFX6Q8HWS3 928 aa33.27■■■□□ 2.92
CBX4-203ENST00000494546 PDCD7Q8N8D1 485 aaKnown RBP33.27■■■□□ 2.92
CBX4-203ENST00000494546 TPCN2Q8NHX9 752 aa33.27■■■□□ 2.92
CBX4-203ENST00000494546 PIH1D2Q8WWB5 315 aa33.27■■■□□ 2.92
CBX4-203ENST00000494546 FUBP1Q96AE4 644 aaKnown RBP33.27■■■□□ 2.92
CBX4-203ENST00000494546 SCRN2Q96FV2 425 aa33.27■■■□□ 2.92
CBX4-203ENST00000494546 MRFAP1L1Q96HT8 127 aa33.27■■■□□ 2.92
CBX4-203ENST00000494546 SALL4Q9UJQ4 1053 aa33.27■■■□□ 2.92
CBX4-203ENST00000494546 DOLKQ9UPQ8 538 aa33.27■■■□□ 2.92
CBX4-203ENST00000494546 PCDHA13Q9Y5I0 950 aa33.27■■■□□ 2.92
CBX4-203ENST00000494546 SRRM3A6NNA2 597 aaPredicted RBP33.26■■■□□ 2.91
CBX4-203ENST00000494546 LMO7DNF2Z398 122 aa33.26■■■□□ 2.91
CBX4-203ENST00000494546 KCNK1O00180 336 aa33.26■■■□□ 2.91
CBX4-203ENST00000494546 CELA2BP08218 269 aaPredicted RBP33.26■■■□□ 2.91
CBX4-203ENST00000494546 ALPIP09923 528 aa33.26■■■□□ 2.91
CBX4-203ENST00000494546 LHCGRP22888 699 aa33.26■■■□□ 2.91
CBX4-203ENST00000494546 ARHGEF7Q14155 803 aa33.26■■■□□ 2.91
CBX4-203ENST00000494546 CDKN3Q16667 212 aa33.26■■■□□ 2.91
CBX4-203ENST00000494546 ALG1LQ6GMV1 187 aa33.26■■■□□ 2.91
CBX4-203ENST00000494546 ESRP1Q6NXG1 681 aaKnown RBP33.26■■■□□ 2.91
CBX4-203ENST00000494546 TSPAN33Q86UF1 283 aa33.26■■■□□ 2.91
CBX4-203ENST00000494546 PROSER1Q86XN7 944 aa33.26■■■□□ 2.91
CBX4-203ENST00000494546 CCDC170Q8IYT3 715 aa33.26■■■□□ 2.91
CBX4-203ENST00000494546 NDUFAF2Q8N183 169 aa33.26■■■□□ 2.91
CBX4-203ENST00000494546 TFR2Q9UP52 801 aa33.26■■■□□ 2.91
CBX4-203ENST00000494546 TAF4O00268 1085 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 FZD6O60353 706 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 LCA5LO95447 670 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 JCHAINP01591 159 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 KRT10P13645 584 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 CYLC1P35663 651 aaPredicted RBP33.25■■■□□ 2.91
CBX4-203ENST00000494546 EPHB1P54762 984 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 KIAA1024LP59773 190 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 PPIDQ08752 370 aaKnown RBP33.25■■■□□ 2.91
CBX4-203ENST00000494546 IHHQ14623 411 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 PNCKQ6P2M8 343 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 NPNTQ6UXI9 565 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 HSD11B1LQ7Z5J1 315 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 PELI3Q8N2H9 469 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 FSTL5Q8N475 847 aaPredicted RBP33.25■■■□□ 2.91
CBX4-203ENST00000494546 ARRDC2Q8TBH0 407 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 IFI44Q8TCB0 444 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 MCCC1Q96RQ3 725 aaPredicted RBP33.25■■■□□ 2.91
CBX4-203ENST00000494546 WDR26Q9H7D7 661 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 NCKIPSDQ9NZQ3 722 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 CLCA2Q9UQC9 943 aa33.25■■■□□ 2.91
CBX4-203ENST00000494546 CPED1A4D0V7 1026 aa33.24■■■□□ 2.91
CBX4-203ENST00000494546 YY2O15391 372 aa33.24■■■□□ 2.91
CBX4-203ENST00000494546 ZFXP17010 805 aaPredicted RBP33.24■■■□□ 2.91
CBX4-203ENST00000494546 ETV3P41162 512 aa33.24■■■□□ 2.91
CBX4-203ENST00000494546 DYNLT1P63172 113 aa33.24■■■□□ 2.91
CBX4-203ENST00000494546 CYP4F3Q08477 520 aa33.24■■■□□ 2.91
CBX4-203ENST00000494546 NIPAL4Q0D2K0 466 aa33.24■■■□□ 2.91
CBX4-203ENST00000494546 ELOCQ15369 112 aa33.24■■■□□ 2.91
CBX4-203ENST00000494546 NR0B2Q15466 257 aa33.24■■■□□ 2.91
CBX4-203ENST00000494546 KCTD16Q68DU8 428 aa33.24■■■□□ 2.91
CBX4-203ENST00000494546 DTD2Q96FN9 168 aa33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms