RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 PCED1AQ9H1Q7 454 aa8.28□□□□□ -1.08
RIF1-211ENST00000494333 NEUROG2Q9H2A3 272 aa8.28□□□□□ -1.08
RIF1-211ENST00000494333 PABPC3Q9H361 631 aaKnown RBP8.28□□□□□ -1.08
RIF1-211ENST00000494333 SLC32A1Q9H598 525 aa8.28□□□□□ -1.08
RIF1-211ENST00000494333 SGK2Q9HBY8 427 aa8.28□□□□□ -1.08
RIF1-211ENST00000494333 ARHGEF38Q9NXL2 777 aa8.28□□□□□ -1.08
RIF1-211ENST00000494333 NOCTQ9UK39 431 aaKnown RBP8.28□□□□□ -1.08
RIF1-211ENST00000494333 SCML1Q9UN30 329 aa8.28□□□□□ -1.08
RIF1-211ENST00000494333 SIK3Q9Y2K2 1263 aa8.28□□□□□ -1.08
RIF1-211ENST00000494333 RNF114Q9Y508 228 aa8.28□□□□□ -1.08
RIF1-211ENST00000494333 PAXBP1Q9Y5B6 917 aa8.28□□□□□ -1.08
RIF1-211ENST00000494333 SNX10Q9Y5X0 201 aa8.28□□□□□ -1.08
RIF1-211ENST00000494333 DRGXA6NNA5 263 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 LGALS16A8MUM7 142 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 I6L893 689 aaPredicted RBP8.27□□□□□ -1.09
RIF1-211ENST00000494333 MID1O15344 667 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 SRGAP2O75044 1071 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 RNASEH2AO75792 299 aaKnown RBP8.27□□□□□ -1.09
RIF1-211ENST00000494333 CNTN5O94779 1100 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 IL1BP01584 269 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 FUCA1P04066 466 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 CHRNB2P17787 502 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 MMP8P22894 467 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 CSNK1EP49674 416 aaKnown RBP8.27□□□□□ -1.09
RIF1-211ENST00000494333 GALCP54803 685 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 SUMO1P63165 101 aaKnown RBP8.27□□□□□ -1.09
RIF1-211ENST00000494333 FMO1Q01740 532 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 GRIK2Q13002 908 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 C5orf22Q49AR2 442 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 ALFQ53S48 1182 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 BICRALQ6AI39 1079 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 TRNP1Q6NT89 227 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 USP30Q70CQ3 517 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 ARCQ7LC44 396 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 FAM131BQ86XD5 332 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 AOPEPQ8N6M6 819 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 EMC1Q8N766 993 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 PCDHB18PQ96TA0 734 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 ZDHHC5Q9C0B5 715 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 NAT10Q9H0A0 1025 aaKnown RBP8.27□□□□□ -1.09
RIF1-211ENST00000494333 TMEM51Q9NW97 253 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.27□□□□□ -1.09
RIF1-211ENST00000494333 MPP6Q9NZW5 540 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 SERGEFQ9UGK8 458 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 SLC25A13Q9UJS0 675 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 FBXL7Q9UJT9 491 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 VPS28Q9UK41 221 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 ANGPTL2Q9UKU9 493 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 TBC1D30Q9Y2I9 924 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.27□□□□□ -1.09
RIF1-211ENST00000494333 DAAM1Q9Y4D1 1078 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 SLCO1B1Q9Y6L6 691 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 CACNA1AO00555 2505 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 ITIH6Q6UXX5 1313 aa8.27□□□□□ -1.09
RIF1-211ENST00000494333 SPTBN2O15020 2390 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 NUP205Q92621 2012 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 A0A0D9SEW6 157 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 A0A1B0GVT2 93 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 OR14I1A6ND48 311 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 E9PAM4 449 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 PAX4O43316 350 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 SH3BP5O60239 455 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 ENDOD1O94919 500 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 MPOP05164 745 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 RHOCP08134 193 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 UNGP13051 313 aaPredicted RBP8.26□□□□□ -1.09
RIF1-211ENST00000494333 ATP1A3P13637 1013 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 CD59P13987 128 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 C5AR1P21730 350 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 CD27P26842 260 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 RDXP35241 583 aaKnown RBP8.26□□□□□ -1.09
RIF1-211ENST00000494333 BCL6P41182 706 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 NSFP46459 744 aaKnown RBP8.26□□□□□ -1.09
RIF1-211ENST00000494333 PSMD8P48556 350 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 AFF3P51826 1226 aaKnown RBP8.26□□□□□ -1.09
RIF1-211ENST00000494333 KRT83P78385 493 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 SIM1P81133 766 aaPredicted RBP8.26□□□□□ -1.09
RIF1-211ENST00000494333 SLC14A1Q13336 389 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 ELAVL3Q14576 367 aaKnown RBP8.26□□□□□ -1.09
RIF1-211ENST00000494333 DLG2Q15700 870 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 CDO1Q16878 200 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 HLA-BQ31612 363 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 ANO6Q4KMQ2 910 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 RAB6CQ53S08 254 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 KIAA0895LQ68EN5 471 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 NCEH1Q6PIU2 408 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.26□□□□□ -1.09
RIF1-211ENST00000494333 TRIM72Q6ZMU5 477 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 APTXQ7Z2E3 356 aaKnown RBP8.26□□□□□ -1.09
RIF1-211ENST00000494333 BNIPLQ7Z465 357 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 TFAP2DQ7Z6R9 452 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 PIP4P1Q86T03 277 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 SETD3Q86TU7 594 aaPredicted RBP8.26□□□□□ -1.09
RIF1-211ENST00000494333 ZNF683Q8IZ20 524 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 OR14C36Q8NHC7 312 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 RXFP2Q8WXD0 754 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 ERGIC2Q96RQ1 377 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 HAPLN3Q96S86 360 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 C11orf70Q9BRQ4 267 aa8.26□□□□□ -1.09
RIF1-211ENST00000494333 RAB6CQ9H0N0 254 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms