RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 GTPBP2Q9BX10 602 aaKnown RBP5.44□□□□□ -1.54
PTCD3-219ENST00000494323 NUSAP1Q9BXS6 441 aaKnown RBP5.44□□□□□ -1.54
PTCD3-219ENST00000494323 FGFBP2Q9BYJ0 223 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 MTMR12Q9C0I1 747 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 SLC32A1Q9H598 525 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 NLRC4Q9NPP4 1024 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 GDAP2Q9NXN4 497 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 RBAKQ9NYW8 714 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-219ENST00000494323 MOCS1Q9NZB8 636 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 PPP4R1LQ9P1A2 415 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 CALCOCO1Q9P1Z2 691 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 CFAP97Q9P2B7 532 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 KLK13Q9UKR3 277 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 MMP17Q9ULZ9 603 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 ARHGAP26Q9UNA1 814 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 EXOC7Q9UPT5 735 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 KIF3AQ9Y496 699 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 CPQQ9Y646 472 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 CLIC4Q9Y696 253 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 ATXN2Q99700 1313 aaKnown RBP5.44□□□□□ -1.54
PTCD3-219ENST00000494323 ACACAQ13085 2346 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 TCRBV21S2A2A0A5A6 115 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 RASA4BC9J798 803 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 F8VP50 259 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 CLDN5O00501 218 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 TRIM24O15164 1050 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 HOXA3O43365 443 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-219ENST00000494323 RASA4O43374 803 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 EIF5BO60841 1220 aaKnown RBP5.43□□□□□ -1.54
PTCD3-219ENST00000494323 APODP05090 189 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 TMEM191BP0C7N4 346 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 MBL2P11226 248 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-219ENST00000494323 ANXA13P27216 316 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 ABCD1P33897 745 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 MAGEA11P43364 429 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 ATXN3P54252 364 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-219ENST00000494323 SLC7A9P82251 487 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 POU5F1Q01860 360 aaKnown RBP5.43□□□□□ -1.54
PTCD3-219ENST00000494323 GFPT1Q06210 699 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-219ENST00000494323 MYO1EQ12965 1108 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 RESTQ13127 1097 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 DUSP8Q13202 625 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 GRM7Q14831 915 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 C4orf46Q504U0 113 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 MDH1BQ5I0G3 518 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 L1TD1Q5T7N2 865 aaKnown RBP5.43□□□□□ -1.54
PTCD3-219ENST00000494323 RRAGBQ5VZM2 374 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 LYSMD4Q5XG99 296 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 C19orf48Q6RUI8 117 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 FAM111BQ6SJ93 734 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 VSTM1Q6UX27 236 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 C4orf50Q6ZRC1 276 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 CBWD2Q8IUF1 395 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 BRSK2Q8IWQ3 736 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 LRRC52Q8N7C0 313 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 PNPLA1Q8N8W4 532 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 OR6B3Q8NGW1 331 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 MYCBPAPQ8TBZ2 947 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 SPATA18Q8TC71 538 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 WBP2Q969T9 261 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 MYLPFQ96A32 169 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 SLC35A4Q96G79 324 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 PCED1BQ96HM7 432 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 CLPTM1LQ96KA5 538 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 SPATA17Q96L03 361 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 SGCZQ96LD1 299 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 KCNK16Q96T55 309 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 MRPL45Q9BRJ2 306 aaKnown RBP5.43□□□□□ -1.54
PTCD3-219ENST00000494323 BTBD1Q9H0C5 482 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 SNX25Q9H3E2 840 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 LMBRD1Q9NUN5 540 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 TMEM30AQ9NV96 361 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 PANK4Q9NVE7 773 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 INTS13Q9NVM9 706 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 AJAP1Q9UKB5 411 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-219ENST00000494323 PILRBQ9UKJ0 227 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 ITGA11Q9UKX5 1188 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 CDH9Q9ULB4 789 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 SMC3Q9UQE7 1217 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 NME7Q9Y5B8 376 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 PTPRJQ12913 1337 aa5.43□□□□□ -1.54
PTCD3-219ENST00000494323 MYH10P35580 1976 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 KIAA1549LQ6ZVL6 1849 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 ZNF233A6NK53 670 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 SLC9A3R1O14745 358 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-219ENST00000494323 COCHO43405 550 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 CREB3O43889 395 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 TNNC2P02585 160 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 DLATP10515 647 aaKnown RBP5.42□□□□□ -1.54
PTCD3-219ENST00000494323 TYRP14679 529 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 ALOX15P16050 662 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-219ENST00000494323 GAP43P17677 238 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 DDCP20711 480 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 WARSP23381 471 aaKnown RBP5.42□□□□□ -1.54
PTCD3-219ENST00000494323 YWHAQP27348 245 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 HOXD13P35453 343 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 PIK3CBP42338 1070 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 TNFRSF4P43489 277 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 PRIM2P49643 509 aa5.42□□□□□ -1.54
PTCD3-219ENST00000494323 PGFP49763 221 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms