RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 ABCD3P28288 659 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 ADSSP30520 456 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 HOXA7P31268 230 aaPredicted RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 TLX1P31314 330 aaPredicted RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 MCM5P33992 734 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 GRK5P34947 590 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 GNL1P36915 607 aaPredicted RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 GP5P40197 560 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 PSMB10P40306 273 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 EIF2DP41214 584 aaKnown RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SKIV2L2P42285 1042 aaKnown RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 ACAA2P42765 397 aaKnown RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 MTIF2P46199 727 aaKnown RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 AARSP49588 968 aaKnown RBP eCLIP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 VPS41P49754 854 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 HNMTP50135 292 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 CPT1AP50416 773 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 PPP5CP53041 499 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SUMO3P55854 103 aaPredicted RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 WDR5P61964 334 aaKnown RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 COG7P83436 770 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 GBE1Q04446 702 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 CBX3Q13185 183 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 LASP1Q14847 261 aaKnown RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 CLCA4Q14CN2 919 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 RAB30Q15771 203 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 BAK1Q16611 211 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SMU1Q2TAY7 513 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 GLE1Q53GS7 698 aaKnown RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 HSP90AA5PQ58FG0 334 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 PLEKHS1Q5SXH7 462 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 GARNL3Q5VVW2 1013 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 TPGS2Q68CL5 300 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 NADSYN1Q6IA69 706 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 FBXO38Q6PIJ6 1188 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SLC30A9Q6PML9 568 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SLC22A25Q6T423 547 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 KLHL17Q6TDP4 642 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 CYP20A1Q6UW02 462 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SLC39A5Q6ZMH5 540 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 GLRX5Q86SX6 157 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 ADCK1Q86TW2 530 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SESTD1Q86VW0 696 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 MON1AQ86VX9 555 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SCN4BQ8IWT1 228 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 DIS3L2Q8IYB7 885 aaKnown RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 MYOCDQ8IZQ8 938 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 LRRC43Q8N309 656 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 FSTL5Q8N475 847 aaPredicted RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 AFAP1Q8N556 730 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 TTC39CQ8N584 583 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 USP38Q8NB14 1042 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 Q8NFD4 153 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 RASSF8Q8NHQ8 419 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SPATA20Q8TB22 786 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 STYXQ8WUJ0 223 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 TMEM174Q8WUU8 243 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 C17orf50Q8WW18 174 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 OIT3Q8WWZ8 545 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 TUBGCP3Q96CW5 907 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 IQCDQ96DY2 449 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 RBM14Q96PK6 669 aaKnown RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 RAB3IPQ96QF0 476 aaPredicted RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 TXN2Q99757 166 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 TBCDQ9BTW9 1192 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 THUMPD3Q9BV44 507 aaKnown RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 FUT8Q9BYC5 575 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 TWSG1Q9GZX9 223 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 CLSTN2Q9H4D0 955 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 C17orf75Q9HAS0 396 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 TM9SF3Q9HD45 589 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 MLXIPLQ9NP71 852 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SLC35C2Q9NQQ7 365 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 NECTIN3Q9NQS3 549 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SERINC1Q9NRX5 453 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 QPCTLQ9NXS2 382 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 AKAP7Q9P0M2 348 aaPredicted RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 COX16Q9P0S2 106 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 DNAJB11Q9UBS4 358 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 AFF4Q9UHB7 1163 aaKnown RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 ANAPC5Q9UJX4 755 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 AGO2Q9UKV8 859 aaKnown RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 GRID1Q9ULK0 1009 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 ICAM5Q9UMF0 924 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 CAMK2AQ9UQM7 478 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 MAN2B2Q9Y2E5 1009 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SLC27A6Q9Y2P4 619 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 TMED5Q9Y3A6 229 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 JRKLQ9Y4A0 524 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 LYVE1Q9Y5Y7 322 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SESN1Q9Y6P5 492 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 FAM169AQ9Y6X4 670 aa2.3□□□□□ -2.04
PTPN12-212ENST00000494248 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 ZCCHC6Q5VYS8 1495 aaKnown RBP2.3□□□□□ -2.04
PTPN12-212ENST00000494248 LMTK3Q96Q04 1460 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 ARPC4-TTLL3A0A0A6YYG9 625 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 RNF103-CHMP3A0A140T963 221 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 FAM234BA2RU67 622 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 MBD3L4A6NDZ8 208 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms