RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 SPC24Q8NBT2 197 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 EXD1Q8NHP7 514 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 BTN2A2Q8WVV5 523 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 KRT35Q92764 455 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 CAAP1Q9H8G2 361 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 KCTD5Q9NXV2 234 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 MSRB2Q9Y3D2 182 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 CSNK1G3Q9Y6M4 447 aa22.69■■□□□ 1.22
SNIP1-203ENST00000493916 AKAP13Q12802 2813 aa22.68■■□□□ 1.22
SNIP1-203ENST00000493916 hCG_1818297A0A087WSY0 165 aa22.68■■□□□ 1.22
SNIP1-203ENST00000493916 A8MX80 341 aa22.68■■□□□ 1.22
SNIP1-203ENST00000493916 SCAMP1O15126 338 aa22.68■■□□□ 1.22
SNIP1-203ENST00000493916 SIGLEC6O43699 453 aa22.68■■□□□ 1.22
SNIP1-203ENST00000493916 CST8O60676 142 aa22.68■■□□□ 1.22
SNIP1-203ENST00000493916 C1SP09871 688 aa22.68■■□□□ 1.22
SNIP1-203ENST00000493916 ALPPL2P10696 532 aa22.68■■□□□ 1.22
SNIP1-203ENST00000493916 CTNNA1P35221 906 aaKnown RBP22.68■■□□□ 1.22
SNIP1-203ENST00000493916 ACADVLP49748 655 aa22.68■■□□□ 1.22
SNIP1-203ENST00000493916 RPL26P61254 145 aaKnown RBP22.68■■□□□ 1.22
SNIP1-203ENST00000493916 PPP2R5EQ16537 467 aa22.68■■□□□ 1.22
SNIP1-203ENST00000493916 HS1BP3Q53T59 392 aa22.68■■□□□ 1.22
SNIP1-203ENST00000493916 CBARPQ8N350 705 aaPredicted RBP22.68■■□□□ 1.22
SNIP1-203ENST00000493916 CNTD1Q8N815 330 aa22.68■■□□□ 1.22
SNIP1-203ENST00000493916 APOOQ9BUR5 198 aa22.68■■□□□ 1.22
SNIP1-203ENST00000493916 PNMA8BQ9ULN7 279 aaPredicted RBP22.68■■□□□ 1.22
SNIP1-203ENST00000493916 RPL26L1Q9UNX3 145 aaKnown RBP22.68■■□□□ 1.22
SNIP1-203ENST00000493916 GOLGA6L6A8MZA4 724 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 FFAR2O15552 330 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 MMP2P08253 660 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 CDK4P11802 303 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 CKMT2P17540 419 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 HTR1BP28222 390 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 DNAJC3Q13217 504 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 ACOX1Q15067 660 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 PRKD1Q15139 912 aaPredicted RBP22.67■■□□□ 1.22
SNIP1-203ENST00000493916 ESRP1Q6NXG1 681 aaKnown RBP22.67■■□□□ 1.22
SNIP1-203ENST00000493916 KIAA1328Q86T90 577 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 PHACTR4Q8IZ21 702 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 TXLNBQ8N3L3 684 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.67■■□□□ 1.22
SNIP1-203ENST00000493916 LRRC57Q8N9N7 239 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 PLA2G15Q8NCC3 412 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 ATL2Q8NHH9 583 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 NUS1Q96E22 293 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 DUSP23Q9BVJ7 150 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 TMEM121BQ9BXQ6 578 aaPredicted RBP22.67■■□□□ 1.22
SNIP1-203ENST00000493916 APOBEC3BQ9UH17 382 aaKnown RBP22.67■■□□□ 1.22
SNIP1-203ENST00000493916 OR1A2Q9Y585 309 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 ACACBO00763 2458 aa22.67■■□□□ 1.22
SNIP1-203ENST00000493916 A0A0J9YYE9 177 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 AQP9O43315 295 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 RFPL3O75679 317 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 PRLP01236 227 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 TRBC1P01850 177 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 HOXC4P09017 264 aaPredicted RBP22.66■■□□□ 1.22
SNIP1-203ENST00000493916 ACP1P24666 158 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 TRIM23P36406 574 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 NAP1L1P55209 391 aaKnown RBP22.66■■□□□ 1.22
SNIP1-203ENST00000493916 KIAA1024LP59773 190 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 ILKQ13418 452 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 ARHGEF7Q14155 803 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 KAZNQ674X7 775 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 CCDC50Q8IVM0 306 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 FAM181AQ8N9Y4 354 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 GATA6Q92908 595 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 DTD2Q96FN9 168 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 SLC13A1Q9BZW2 595 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 PCDH9Q9HC56 1237 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 SPASTQ9UBP0 616 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 DNPEPQ9ULA0 475 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 CHKBQ9Y259 395 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 PCDHA3Q9Y5H8 950 aa22.66■■□□□ 1.22
SNIP1-203ENST00000493916 CAPN8A6NHC0 703 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 K7ESM1 405 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 ALPIP09923 528 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 PECAM1P16284 738 aaPredicted RBP22.65■■□□□ 1.22
SNIP1-203ENST00000493916 ZNF30P17039 623 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 CTPS1P17812 591 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 CTNNA2P26232 953 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 HNF1BP35680 557 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 CD86P42081 329 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 BLKP51451 505 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 EPHB1P54762 984 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 COPS2P61201 443 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 SKOR1P84550 965 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 PPARDQ03181 441 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 ADCY2Q08462 1091 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 SMAD1Q15797 465 aaKnown RBP22.65■■□□□ 1.22
SNIP1-203ENST00000493916 PNCKQ6P2M8 343 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 TMPRSS7Q7RTY8 843 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 HSD11B1LQ7Z5J1 315 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 TSPAN33Q86UF1 283 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 RBFAQ8N0V3 343 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 GALNT15Q8N3T1 639 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 KIAA1524Q8TCG1 905 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 TFB1MQ8WVM0 346 aaKnown RBP22.65■■□□□ 1.22
SNIP1-203ENST00000493916 P3H4Q92791 437 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 WDR92Q96MX6 357 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 LRRC61Q9BV99 259 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 TCEAL2Q9H3H9 227 aaPredicted RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms