RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 BCAT2O15382 392 aaPredicted RBP4.32□□□□□ -1.72
ITGB1-216ENST00000493758 PLRG1O43660 514 aaKnown RBP4.32□□□□□ -1.72
ITGB1-216ENST00000493758 PYGLP06737 847 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 LINC00271P0C7V0 271 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 SRCP12931 536 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 SSTR2P30874 369 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 EIF3BP55884 814 aaKnown RBP4.32□□□□□ -1.72
ITGB1-216ENST00000493758 BRWD1-AS2P59051 145 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 ERVFC1-1P60608 527 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 ITGADQ13349 1161 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 TNFAIP1Q13829 316 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 ZRSR1Q15695 479 aaKnown RBP4.32□□□□□ -1.72
ITGB1-216ENST00000493758 RHBDF2Q6PJF5 856 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 SLC46A3Q7Z3Q1 461 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 CHERPQ8IWX8 916 aaKnown RBP4.32□□□□□ -1.72
ITGB1-216ENST00000493758 SPATA22Q8NHS9 363 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 NEK9Q8TD19 979 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 MTBPQ96DY7 904 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 SAAL1Q96ER3 474 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 HES6Q96HZ4 224 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 HEMGNQ9BXL5 484 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 JMJD4Q9H9V9 463 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 VEZTQ9HBM0 779 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 BPIFA1Q9NP55 256 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 SIX4Q9UIU6 781 aa4.32□□□□□ -1.72
ITGB1-216ENST00000493758 PMS2P2O95744 297 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 STX2P32856 288 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 PAFAH1B1P43034 410 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 FASLGP48023 281 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 EEF1A2Q05639 463 aaKnown RBP4.31□□□□□ -1.72
ITGB1-216ENST00000493758 USP41Q3LFD5 358 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 MMEL1Q495T6 779 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 C6orf141Q5SZD1 244 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 ACAD10Q6JQN1 1059 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 METTL2BQ6P1Q9 378 aaKnown RBP4.31□□□□□ -1.72
ITGB1-216ENST00000493758 FOXRED2Q8IWF2 684 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 WDR63Q8IWG1 891 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 ZBTB2Q8N680 514 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 HUS1BQ8NHY5 278 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 METTL2AQ96IZ6 378 aaKnown RBP4.31□□□□□ -1.72
ITGB1-216ENST00000493758 IL17FQ96PD4 163 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 PKP4Q99569 1192 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 STRA6Q9BX79 667 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 PAIP1Q9H074 479 aaKnown RBP4.31□□□□□ -1.72
ITGB1-216ENST00000493758 SLC9A2Q9UBY0 812 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 TINAGQ9UJW2 476 aa4.31□□□□□ -1.72
ITGB1-216ENST00000493758 FBXO9Q9UK97 447 aaPredicted RBP4.31□□□□□ -1.72
ITGB1-216ENST00000493758 LSM4Q9Y4Z0 139 aaKnown RBP4.31□□□□□ -1.72
ITGB1-216ENST00000493758 SEC14L5O43304 696 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 TIPRLO75663 272 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 TMEM63AO94886 807 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 FTCDO95954 541 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 METAP2P50579 478 aaKnown RBP eCLIP4.3□□□□□ -1.72
ITGB1-216ENST00000493758 TUBP50607 506 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 ZNF155Q12901 538 aaPredicted RBP4.3□□□□□ -1.72
ITGB1-216ENST00000493758 SLC39A14Q15043 492 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 PPP2R5BQ15173 497 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 SF3B4Q15427 424 aaKnown RBP eCLIP4.3□□□□□ -1.723e-10■□□□□ 10.3
ITGB1-216ENST00000493758 ZNF672Q499Z4 452 aaPredicted RBP4.3□□□□□ -1.72
ITGB1-216ENST00000493758 C9orf50Q5SZB4 431 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 LCTLQ6UWM7 567 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 CCNI2Q6ZMN8 369 aaPredicted RBP4.3□□□□□ -1.72
ITGB1-216ENST00000493758 QSOX2Q6ZRP7 698 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 HEATR4Q86WZ0 1026 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 ZCCHC9Q8N567 271 aaKnown RBP4.3□□□□□ -1.72
ITGB1-216ENST00000493758 NAXEQ8NCW5 288 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 CADM4Q8NFZ8 388 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 LNX1Q8TBB1 728 aaPredicted RBP4.3□□□□□ -1.72
ITGB1-216ENST00000493758 CREB3L4Q8TEY5 395 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 PPM1MQ96MI6 270 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 MPHOSPH8Q99549 860 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 SLC25A18Q9H1K4 315 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 PRKRIP1Q9H875 184 aaPredicted RBP4.3□□□□□ -1.72
ITGB1-216ENST00000493758 UBTD1Q9HAC8 227 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 MMP25Q9NPA2 562 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 NOX4Q9NPH5 578 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 CNGB3Q9NQW8 809 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 ASAH2Q9NR71 780 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 TAS2R10Q9NYW0 307 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 ABI3Q9P2A4 366 aa4.3□□□□□ -1.72
ITGB1-216ENST00000493758 A0A1W2PRG0 241 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 hDV102S1A0JD36 115 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 A6NLC8 198 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 AKR1B15C9JRZ8 316 aaPredicted RBP4.29□□□□□ -1.72
ITGB1-216ENST00000493758 SOCS6O14544 535 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 LDB3O75112 727 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 SEC14L2O76054 403 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 KDM4BO94953 1096 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 RRM1P23921 792 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 CLCNKAP51800 687 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 DLX5P56178 289 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 DDR1Q08345 913 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 TROAPQ12815 778 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 GSTA3Q16772 222 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 ALG11Q2TAA5 492 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 ALFQ53S48 1182 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 FRG2Q64ET8 278 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 B3GNT6Q6ZMB0 384 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 TAOK1Q7L7X3 1001 aa4.29□□□□□ -1.72
ITGB1-216ENST00000493758 CUZD1Q86UP6 607 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms