RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 MARK1Q9P0L2 795 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 MARCH4Q9P2E8 410 aaPredicted RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 COPG2Q9UBF2 871 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 EVLQ9UI08 416 aaPredicted RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 RPL26L1Q9UNX3 145 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 ACOT9Q9Y305 439 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 ZNF711Q9Y462 761 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 WNT6Q9Y6F9 365 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 MKI67P46013 3256 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 STX7O15400 261 aaKnown RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 SMAD6O43541 496 aaKnown RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 SNNO75324 88 aaPredicted RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 DCTN3O75935 186 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 PIGNO95427 931 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 PAPLNO95428 1278 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 S1PR4O95977 384 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 GSRP00390 522 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 MYL2P10916 166 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 SRCP12931 536 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 KCNA4P22459 653 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 GRK2P25098 689 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 SERPINA4P29622 427 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 WEE1P30291 646 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 PBX2P40425 430 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 CTSOP43234 321 aaPredicted RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 NRIP1P48552 1158 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 STK19P49842 368 aaPredicted RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 STC1P52823 247 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 CORO7P57737 925 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 SNRPD1P62314 119 aaKnown RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 OCRLQ01968 901 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 SULT2A1Q06520 285 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 OVGP1Q12889 678 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 ZNF460Q14592 562 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 RAB30Q15771 203 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 TYSND1Q2T9J0 566 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 LACTB2Q53H82 288 aaPredicted RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 ZNF789Q5FWF6 425 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 LY6G5CQ5SRR4 150 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 HECTD2Q5U5R9 776 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 PPP2R2DQ66LE6 453 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 ZYG11AQ6WRX3 759 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 ZCCHC23Q6ZST2 131 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 SDCCAG8Q86SQ7 713 aaPredicted RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 TBC1D1Q86TI0 1168 aaPredicted RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 LDB1Q86U70 411 aaPredicted RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 C10orf107Q8IVU9 208 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 ARID3BQ8IVW6 561 aaPredicted RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 CEP97Q8IW35 865 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 RYBPQ8N488 228 aaPredicted RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 TTC30BQ8N4P2 665 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 CELF5Q8N6W0 485 aaKnown RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 PCDH20Q8N6Y1 951 aaKnown RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 KIAA1958Q8N8K9 716 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 GBP7Q8N8V2 638 aaPredicted RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 MDGA1Q8NFP4 955 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 OR2AP1Q8NGE2 309 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 OR6K2Q8NGY2 324 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 ITFG1Q8TB96 612 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 GDPD5Q8WTR4 605 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 KCTD4Q8WVF5 259 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 ISG20Q96AZ6 181 aaKnown RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 CDKN2AIPNLQ96HQ2 116 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 ZSWIM3Q96MP5 696 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 CDCA3Q99618 268 aaPredicted RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 OLFM1Q99784 485 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 OMDQ99983 421 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 CEP44Q9C0F1 390 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 TNKS2Q9H2K2 1166 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 NKX2-4Q9H2Z4 354 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 SUDS3Q9H7L9 328 aaPredicted RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 DZANK1Q9NVP4 752 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 INTS10Q9NVR2 710 aaKnown RBP9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 THAP1Q9NVV9 213 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 HS3ST2Q9Y278 367 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 PCDHB9Q9Y5E1 797 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 COL4A3Q01955 1670 aa9.16□□□□□ -0.94
SMARCC1-208ENST00000492896 PLXNB3Q9ULL4 1909 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 MUC22E2RYF6 1773 aaPredicted RBP9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 TMEM114B3SHH9 223 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 PFDN6O15212 129 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 HTRA2O43464 458 aaPredicted RBP9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 KLHL2O95198 593 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 RALBP11234 206 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 CTPS1P17812 591 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 PMLP29590 882 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 MC4RP32245 332 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 SLC8A1P32418 973 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 ABL2P42684 1182 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 ARFIP2P53365 341 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 PRKAA2P54646 552 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 CCDC15Q0P6D6 951 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 ITGA9Q13797 1035 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 SEMA3AQ14563 771 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 SETDB1Q15047 1291 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 AARS2Q5JTZ9 985 aaKnown RBP9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 DGKKQ5KSL6 1271 aa9.15□□□□□ -0.94
SMARCC1-208ENST00000492896 CES4AQ5XG92 561 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms