RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 SATB2Q9UPW6 733 aa17.32■□□□□ 0.36
SGMS1-204ENST00000492601 ENTPD2Q9Y5L3 495 aa17.32■□□□□ 0.36
SGMS1-204ENST00000492601 GOLGA6L19H0YKK7 550 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 CACNB4O00305 520 aaPredicted RBP17.31■□□□□ 0.36
SGMS1-204ENST00000492601 MAFKO60675 156 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 TNFP01375 233 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 CYP1A2P05177 515 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 CR2P20023 1033 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 CDH6P55285 790 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 PCBP4P57723 403 aaKnown RBP17.31■□□□□ 0.36
SGMS1-204ENST00000492601 MMRN1Q13201 1228 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 FOXR1Q6PIV2 292 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 LVRNQ6Q4G3 990 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 GKN2Q86XP6 184 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 SPACA3Q8IXA5 215 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 LSMEM2Q8N112 164 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 NIPA2Q8N8Q9 360 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 CCDC74AQ96AQ1 378 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 NUDCD1Q96RS6 583 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 PRORYQ9H606 182 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 NOD2Q9HC29 1040 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 FGF22Q9HCT0 170 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 IFNKQ9P0W0 207 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 RABGEF1Q9UJ41 708 aa17.31■□□□□ 0.36
SGMS1-204ENST00000492601 LUC7L2Q9Y383 392 aaKnown RBP17.31■□□□□ 0.36
SGMS1-204ENST00000492601 AHCTF1Q8WYP5 2266 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 A0A1W2PNU3 283 aaPredicted RBP17.3■□□□□ 0.36
SGMS1-204ENST00000492601 PMS2P1A4D2B8 440 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 MYO1FO00160 1098 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 HTRA2O43464 458 aaPredicted RBP17.3■□□□□ 0.36
SGMS1-204ENST00000492601 CPP00450 1065 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 CD48P09326 243 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 SERPINB6P35237 376 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 GJC1P36383 396 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 HSPA9P38646 679 aaKnown RBP17.3■□□□□ 0.36
SGMS1-204ENST00000492601 MMP13P45452 471 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 KIAA1024LP59773 190 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 TLE3Q04726 772 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 TRAF2Q12933 501 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 SPIDRQ14159 915 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 CNGA3Q16281 694 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 CCDC122Q5T0U0 273 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 ALKBH5Q6P6C2 394 aaKnown RBP17.3■□□□□ 0.36
SGMS1-204ENST00000492601 CPNE8Q86YQ8 564 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 BBS5Q8N3I7 341 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 ZNF248Q8NDW4 579 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 OR56A4Q8NGH8 313 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 NSMCE1Q8WV22 266 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 FCRL3Q96P31 734 aaPredicted RBP17.3■□□□□ 0.36
SGMS1-204ENST00000492601 MGME1Q9BQP7 344 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 LGR4Q9BXB1 951 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 ASCL3Q9NQ33 180 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 MOSPD1Q9UJG1 213 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 DGKBQ9Y6T7 804 aa17.3■□□□□ 0.36
SGMS1-204ENST00000492601 GCN1Q92616 2671 aaKnown RBP17.29■□□□□ 0.36
SGMS1-204ENST00000492601 SOCS5O75159 536 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 TCEA3O75764 348 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 DXOO77932 396 aaKnown RBP17.29■□□□□ 0.36
SGMS1-204ENST00000492601 GYPCP04921 128 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 CASP14P31944 242 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 VIPR1P32241 457 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 PTPRRQ15256 657 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 MARC1Q5VT66 337 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 PNCKQ6P2M8 343 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 TAF8Q7Z7C8 310 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 ZNF564Q8TBZ8 553 aaPredicted RBP17.29■□□□□ 0.36
SGMS1-204ENST00000492601 NUS1Q96E22 293 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 HIC2Q96JB3 615 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 COQ10AQ96MF6 247 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 RBM15Q96T37 977 aaKnown RBP eCLIP17.29■□□□□ 0.363e-8■■■■□ 25.5
SGMS1-204ENST00000492601 WDR26Q9H7D7 661 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 SUDS3Q9H7L9 328 aaPredicted RBP17.29■□□□□ 0.36
SGMS1-204ENST00000492601 CYP4F12Q9HCS2 524 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 NT5MQ9NPB1 228 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 KALRNO60229 2985 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 ATMQ13315 3056 aa17.29■□□□□ 0.36
SGMS1-204ENST00000492601 EIF4E1BA6NMX2 242 aaKnown RBP17.28■□□□□ 0.36
SGMS1-204ENST00000492601 MFSD11O43934 449 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 KELP23276 732 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 IL4RP24394 825 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 RBMS1P29558 406 aaKnown RBP17.28■□□□□ 0.36
SGMS1-204ENST00000492601 TRIM23P36406 574 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 PDX1P52945 283 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 ERVPABLB-1P60509 514 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 ITKQ08881 620 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 HADHQ16836 314 aaKnown RBP17.28■□□□□ 0.36
SGMS1-204ENST00000492601 ATP13A4Q4VNC1 1196 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 HSD11B1LQ7Z5J1 315 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 SFTPA2Q8IWL1 248 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 SDR16C5Q8N3Y7 309 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.28■□□□□ 0.36
SGMS1-204ENST00000492601 FAM46DQ8NEK8 389 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 WDR48Q8TAF3 677 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 SPOCK2Q92563 424 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 GRAMD1AQ96CP6 724 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 IQCDQ96DY2 449 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 TMEM168Q9H0V1 697 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 THSD1Q9NS62 852 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 PHTF1Q9UMS5 762 aa17.28■□□□□ 0.36
SGMS1-204ENST00000492601 A0A0U1RQS6 177 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms