RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	CSRP1	P21291	193 aa	Known RBP	13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	RXRG	P48443	463 aa		13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	YPEL5	P62699	121 aa		13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	ARHGEF7	Q14155	803 aa		13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	DARS2	Q6PI48	645 aa	Known RBP	13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451		Q6ZSR6	202 aa		13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	PID1	Q7Z2X4	250 aa		13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	SPATS2	Q86XZ4	545 aa	Known RBP	13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	OR13H1	Q8NG92	308 aa		13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	IFT43	Q96FT9	208 aa		13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	BMF	Q96LC9	184 aa		13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	CARD9	Q9H257	536 aa		13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	SLC32A1	Q9H598	525 aa		13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	IL21R	Q9HBE5	538 aa		13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	TMEM131	Q92545	1883 aa		13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	LRRK1	Q38SD2	2015 aa		13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	ASCC3	Q8N3C0	2202 aa	Known RBP	13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451	TPR	P12270	2363 aa	Known RBP	13.86	□□□□□ -0.19
PTPN7-215	ENST00000492451		A0A0J9YYE9	177 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	CAPN8	A6NHC0	703 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451		A8MX80	341 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	KCNK3	O14649	394 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	PCDHGA12	O60330	932 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	RECQL5	O94762	991 aa	Predicted RBP	13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	HEXIM1	O94992	359 aa	Known RBP	13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	TRBC1	P01850	177 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	CD59	P13987	128 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	ZNF30	P17039	623 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	RBL1	P28749	1068 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	TNNT3	P45378	269 aa	Predicted RBP	13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	PFN3	P60673	137 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	SEMG2	Q02383	582 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	CCDC173	Q0VFZ6	552 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	KLF1	Q13351	362 aa	Predicted RBP	13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	PTK2B	Q14289	1009 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	IHH	Q14623	411 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	ACOX1	Q15067	660 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	WSCD2	Q2TBF2	565 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	INAVA	Q3KP66	663 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	CCDC70	Q6NSX1	233 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	PIP4P1	Q86T03	277 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	TP53I13	Q8NBR0	393 aa	Predicted RBP	13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	TADA1	Q96BN2	335 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	WASF3	Q9UPY6	502 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	COQ6	Q9Y2Z9	468 aa		13.85	□□□□□ -0.19
PTPN7-215	ENST00000492451	EPG5	Q9HCE0	2579 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	ANKRD66	B4E2M5	251 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	FLRT2	O43155	660 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	PRL	P01236	227 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	CTPS1	P17812	591 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	NFKB1	P19838	968 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	SPINK2	P20155	84 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	MSN	P26038	577 aa	Known RBP	13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	HNF1B	P35680	557 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	IGFALS	P35858	605 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	THOP1	P52888	689 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	MTM1	Q13496	603 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	IRF4	Q15306	451 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	CNGA3	Q16281	694 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	ITPRIPL1	Q6GPH6	555 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	DBX2	Q6ZNG2	339 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	NAXD	Q8IW45	347 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	RAVER1	Q8IY67	606 aa	Known RBP	13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	ZNF567	Q8N184	647 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	LPCAT1	Q8NF37	534 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	COQ10A	Q96MF6	247 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	PPP1R2P1	Q96PQ5	205 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	FCRL5	Q96RD9	977 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	LYSMD1	Q96S90	227 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	SRPK1	Q96SB4	655 aa	Known RBP	13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	MLPH	Q9BV36	600 aa	Predicted RBP	13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	MBNL1	Q9NR56	388 aa	Known RBP	13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	GPR27	Q9NS67	375 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	FAM153A	Q9UHL3	310 aa		13.84	□□□□□ -0.19
PTPN7-215	ENST00000492451	SPTY2D1-AS1	A0A0U1RR47	76 aa		13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	SPAAR	A0A1B0GVQ0	90 aa		13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	KCNN4	O15554	427 aa		13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	PMPCB	O75439	489 aa		13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	ANXA9	O76027	345 aa		13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	EPO	P01588	193 aa		13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	ALPI	P09923	528 aa		13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	CEACAM1	P13688	526 aa		13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	LHCGR	P22888	699 aa		13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	CD68	P34810	354 aa	Predicted RBP	13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	GRK6	P43250	576 aa		13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	CDK18	Q07002	472 aa		13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	PDE1C	Q14123	709 aa	Predicted RBP	13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	PCSK7	Q16549	785 aa		13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	QPCT	Q16769	361 aa		13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	CRTC1	Q6UUV9	634 aa		13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	SLC22A18AS	Q8N1D0	253 aa		13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	CBARP	Q8N350	705 aa	Predicted RBP	13.83	□□□□□ -0.2
PTPN7-215	ENST00000492451	ATL2	Q8NHH9	583 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms