RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 CEP41Q9BYV8 373 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 LUC7LQ9NQ29 371 aaKnown RBP24.75■■□□□ 1.55
UPF3A-209ENST00000492270 NLGN3Q9NZ94 848 aa24.75■■□□□ 1.55
UPF3A-209ENST00000492270 APOBEC3BQ9UH17 382 aaKnown RBP24.75■■□□□ 1.55
UPF3A-209ENST00000492270 SCAMP1O15126 338 aa24.74■■□□□ 1.55
UPF3A-209ENST00000492270 AQP9O43315 295 aa24.74■■□□□ 1.55
UPF3A-209ENST00000492270 HEXIM1O94992 359 aaKnown RBP24.74■■□□□ 1.55
UPF3A-209ENST00000492270 CKMT2P17540 419 aa24.74■■□□□ 1.55
UPF3A-209ENST00000492270 AP1B1Q10567 949 aa24.74■■□□□ 1.55
UPF3A-209ENST00000492270 MTM1Q13496 603 aa24.74■■□□□ 1.55
UPF3A-209ENST00000492270 KCTD16Q68DU8 428 aa24.74■■□□□ 1.55
UPF3A-209ENST00000492270 SPOCD1Q6ZMY3 1216 aa24.74■■□□□ 1.55
UPF3A-209ENST00000492270 TMPRSS7Q7RTY8 843 aa24.74■■□□□ 1.55
UPF3A-209ENST00000492270 TMEM139Q8IV31 216 aa24.74■■□□□ 1.55
UPF3A-209ENST00000492270 TPCN2Q8NHX9 752 aa24.74■■□□□ 1.55
UPF3A-209ENST00000492270 LMX1AQ8TE12 382 aa24.74■■□□□ 1.55
UPF3A-209ENST00000492270 MCCC1Q96RQ3 725 aaPredicted RBP24.74■■□□□ 1.55
UPF3A-209ENST00000492270 TDRD1Q9BXT4 1180 aaKnown RBP24.74■■□□□ 1.55
UPF3A-209ENST00000492270 AMACRQ9UHK6 382 aa24.74■■□□□ 1.55
UPF3A-209ENST00000492270 PCDHGA1Q9Y5H4 931 aa24.74■■□□□ 1.55
UPF3A-209ENST00000492270 DUSP10Q9Y6W6 482 aa24.74■■□□□ 1.55
UPF3A-209ENST00000492270 KMT2BQ9UMN6 2715 aaPredicted RBP24.74■■□□□ 1.55
UPF3A-209ENST00000492270 FAM149AA5PLN7 773 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 K7ESM1 405 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 GCATO75600 419 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 ZFXP17010 805 aaPredicted RBP24.73■■□□□ 1.55
UPF3A-209ENST00000492270 PEX5P50542 639 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 IFI35P80217 286 aaPredicted RBP24.73■■□□□ 1.55
UPF3A-209ENST00000492270 ADCY2Q08462 1091 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 C1orf61Q13536 156 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 NFATC4Q14934 902 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 TAZQ16635 292 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 KAZNQ674X7 775 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 CCNI2Q6ZMN8 369 aaPredicted RBP24.73■■□□□ 1.55
UPF3A-209ENST00000492270 HSD11B1LQ7Z5J1 315 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 CNTD1Q8N815 330 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 SPC24Q8NBT2 197 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 KRT35Q92764 455 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 SCRN2Q96FV2 425 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 IL12RB2Q99665 862 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 LRRC61Q9BV99 259 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 SAE1Q9UBE0 346 aaPredicted RBP24.73■■□□□ 1.55
UPF3A-209ENST00000492270 CHKBQ9Y259 395 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 PPIL1Q9Y3C6 166 aa24.73■■□□□ 1.55
UPF3A-209ENST00000492270 LY6G6EA0A0G2JKS1 128 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 NEMP2A6NFY4 417 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 PROS1P07225 676 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 MMP2P08253 660 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 ALPPL2P10696 532 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 CYP2A6P11509 494 aaPredicted RBP24.72■■□□□ 1.55
UPF3A-209ENST00000492270 DAB2P98082 770 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 PDK1Q15118 436 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 TCEA2Q15560 299 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 SMAD1Q15797 465 aaKnown RBP24.72■■□□□ 1.55
UPF3A-209ENST00000492270 ST3GAL2Q16842 350 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 ALG11Q2TAA5 492 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 DEFB133Q30KQ1 61 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 HS1BP3Q53T59 392 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 PRRT3Q5FWE3 981 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 FAXCQ5TGI0 409 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 USP45Q70EL2 814 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 DAAM2Q86T65 1068 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 KATNAL2Q8IYT4 538 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 BTN2A2Q8WVV5 523 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 TSACCQ96A04 125 aaPredicted RBP24.72■■□□□ 1.55
UPF3A-209ENST00000492270 FUBP1Q96AE4 644 aaKnown RBP24.72■■□□□ 1.55
UPF3A-209ENST00000492270 NUS1Q96E22 293 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 APOLD1Q96LR9 279 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 BAG1Q99933 345 aaPredicted RBP24.72■■□□□ 1.55
UPF3A-209ENST00000492270 LACRTQ9GZZ8 138 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 SEPT10Q9P0V9 454 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 U3KQA8 63 aa24.72■■□□□ 1.55
UPF3A-209ENST00000492270 CST8O60676 142 aa24.71■■□□□ 1.55
UPF3A-209ENST00000492270 PRLP01236 227 aa24.71■■□□□ 1.55
UPF3A-209ENST00000492270 CELA2BP08218 269 aaPredicted RBP24.71■■□□□ 1.55
UPF3A-209ENST00000492270 PECAM1P16284 738 aaPredicted RBP24.71■■□□□ 1.55
UPF3A-209ENST00000492270 CES1P23141 567 aa24.71■■□□□ 1.55
UPF3A-209ENST00000492270 ACP1P24666 158 aa24.71■■□□□ 1.55
UPF3A-209ENST00000492270 CDC25BP30305 580 aa24.71■■□□□ 1.55
UPF3A-209ENST00000492270 HNF1BP35680 557 aa24.71■■□□□ 1.55
UPF3A-209ENST00000492270 ETV3P41162 512 aa24.71■■□□□ 1.55
UPF3A-209ENST00000492270 PPARDQ03181 441 aa24.71■■□□□ 1.55
UPF3A-209ENST00000492270 ESRP1Q6NXG1 681 aaKnown RBP24.71■■□□□ 1.55
UPF3A-209ENST00000492270 ENPP7Q6UWV6 458 aa24.71■■□□□ 1.55
UPF3A-209ENST00000492270 HID1Q8IV36 788 aa24.71■■□□□ 1.55
UPF3A-209ENST00000492270 CBARPQ8N350 705 aaPredicted RBP24.71■■□□□ 1.55
UPF3A-209ENST00000492270 SLC13A1Q9BZW2 595 aa24.71■■□□□ 1.55
UPF3A-209ENST00000492270 CLPBQ9H078 707 aa24.71■■□□□ 1.55
UPF3A-209ENST00000492270 SPASTQ9UBP0 616 aa24.71■■□□□ 1.55
UPF3A-209ENST00000492270 CSNK1G3Q9Y6M4 447 aa24.71■■□□□ 1.55
UPF3A-209ENST00000492270 A0A0J9YYE9 177 aa24.7■■□□□ 1.54
UPF3A-209ENST00000492270 PPP1R12AO14974 1030 aaPredicted RBP24.7■■□□□ 1.54
UPF3A-209ENST00000492270 IPO7O95373 1038 aaKnown RBP24.7■■□□□ 1.54
UPF3A-209ENST00000492270 TRBC1P01850 177 aa24.7■■□□□ 1.54
UPF3A-209ENST00000492270 C1SP09871 688 aa24.7■■□□□ 1.54
UPF3A-209ENST00000492270 NFKBIAP25963 317 aa24.7■■□□□ 1.54
UPF3A-209ENST00000492270 CD86P42081 329 aa24.7■■□□□ 1.54
UPF3A-209ENST00000492270 RD3Q7Z3Z2 195 aa24.7■■□□□ 1.54
UPF3A-209ENST00000492270 GALNT15Q8N3T1 639 aa24.7■■□□□ 1.54
UPF3A-209ENST00000492270 DTD2Q96FN9 168 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms