RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 NUDCD1Q96RS6 583 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 CINPQ9BW66 212 aaPredicted RBP8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 DPH1Q9BZG8 443 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 ZWILCHQ9H900 591 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 KCTD5Q9NXV2 234 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 RCOR3Q9P2K3 495 aaPredicted RBP8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 APPL1Q9UKG1 709 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 CAPN11Q9UMQ6 739 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 OR1A2Q9Y585 309 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 GCN1Q92616 2671 aaKnown RBP8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 ATMQ13315 3056 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 A0A087X0T9 212 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 TEX51A0A1B0GUA7 166 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 A0A1W2PQM1 296 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 TMEM202A6NGA9 273 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 DFFAO00273 331 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 DAPK3O43293 454 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 FZD6O60353 706 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 NOBOXO60393 691 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 HEXIM1O94992 359 aaKnown RBP8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 FUCA1P04066 466 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 PRKCGP05129 697 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 FAM228BP0C875 321 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 HTR1BP28222 390 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 SCNN1BP51168 640 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 PCBP4P57723 403 aaKnown RBP8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 ZBED6P86452 979 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 FANCCQ00597 558 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 DPTQ07507 201 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 IHHQ14623 411 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 ASTE1Q2TB18 679 aaPredicted RBP8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 CAVIN1Q6NZI2 390 aaKnown RBP8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 TMCO3Q6UWJ1 677 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 ENPP7Q6UWV6 458 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 TECPR1Q7Z6L1 1165 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 NLRP8Q86W28 1048 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 GKN2Q86XP6 184 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 HID1Q8IV36 788 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 RAVER1Q8IY67 606 aaKnown RBP8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 PELI3Q8N2H9 469 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 KYQ8NBH2 561 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 OR6C4Q8NGE1 309 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 OR56A4Q8NGH8 313 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 PCDH19Q8TAB3 1148 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 GPBAR1Q8TDU6 330 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 PIH1D2Q8WWB5 315 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 SCG3Q8WXD2 468 aaKnown RBP8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 MAML1Q92585 1016 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 SCRN2Q96FV2 425 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 WBP1Q96G27 269 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 SCARF2Q96GP6 870 aaPredicted RBP8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 LIN37Q96GY3 246 aaPredicted RBP8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 TSGA13Q96PP4 275 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 CCDC3Q9BQI4 270 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 LGR4Q9BXB1 951 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 TEX101Q9BY14 249 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 THAP2Q9H0W7 228 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 SP110Q9HB58 689 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 NOD2Q9HC29 1040 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 CBX8Q9HC52 389 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 PCDH18Q9HCL0 1135 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 FGF22Q9HCT0 170 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 KLQ9UEF7 1012 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 IP6K2Q9UHH9 426 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 RABGEF1Q9UJ41 708 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 ACSL6Q9UKU0 697 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 PHTF1Q9UMS5 762 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 SATB2Q9UPW6 733 aa8.4□□□□□ -1.06
SMARCB1-207ENST00000491967 TTC24A2A3L6 582 aaPredicted RBP8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 PMS2P1A4D2B8 440 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 TMX2-CTNND1H3BSU7 103 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 PSMD11O00231 422 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 PDE2AO00408 941 aaPredicted RBP8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 C1QL1O75973 258 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 PGLSO95336 258 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 SERPINC1P01008 464 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 TNFP01375 233 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 GYPCP04921 128 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 CEACAM5P06731 702 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 ELFN1P0C7U0 828 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 MYCLP1P12525 358 aaPredicted RBP8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 GLB1P16278 677 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 LHCGRP22888 699 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 KELP23276 732 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 CCKBRP32239 447 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 ARL4AP40617 200 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 CDH6P55285 790 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 ZFP36L1Q07352 338 aaKnown RBP8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 TRAF2Q12933 501 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 EIF3IQ13347 325 aaKnown RBP8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 HLTFQ14527 1009 aaKnown RBP eCLIP8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 NR1D2Q14995 579 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 PAFAH1B3Q15102 231 aaKnown RBP8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 CNGA3Q16281 694 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 SMTNL2Q2TAL5 461 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 CERCAMQ5T4B2 595 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 CFAP58Q5T655 872 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 GPR155Q7Z3F1 870 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 ZNF438Q7Z4V0 828 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 LUZP1Q86V48 1076 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms