RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 PELI3Q8N2H9 469 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 PLA2G15Q8NCC3 412 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 SPOCK2Q92563 424 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 ZNF599Q96NL3 588 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 LRRC61Q9BV99 259 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 CLPBQ9H078 707 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 ATP13A3Q9H7F0 1226 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 SEPT3Q9UH03 358 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 CSNK1G3Q9Y6M4 447 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 CACNA1GO43497 2377 aa12.76□□□□□ -0.37
SEC61A1-206ENST00000491668 CCDC66A2RUB6 948 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 LRRD1A4D1F6 860 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 NEMP2A6NFY4 417 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 USP27XA6NNY8 438 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 MIF4GDA9UHW6 222 aaKnown RBP12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 AQP9O43315 295 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 HTRA2O43464 458 aaPredicted RBP12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 XPAP23025 273 aaPredicted RBP12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 SERPINA4P29622 427 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 CETN2P41208 172 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 THOP1P52888 689 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 AP1S1P61966 158 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 DAB2P98082 770 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 C1orf61Q13536 156 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 DPYSL3Q14195 570 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 INPP5AQ14642 412 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 PTPRRQ15256 657 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 ALG11Q2TAA5 492 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 DEFB133Q30KQ1 61 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 ZNF569Q5MCW4 686 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 LIPIQ6XZB0 460 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 CCDC50Q8IVM0 306 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 PHACTR4Q8IZ21 702 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 CACTIN-AS1Q8N1I8 211 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 LRRC57Q8N9N7 239 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 PCDH19Q8TAB3 1148 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 LMX1AQ8TE12 382 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 NOD2Q9HC29 1040 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 ZKSCAN5Q9Y2L8 839 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 OR1A2Q9Y585 309 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 PCDHGC4Q9Y5F7 938 aa12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 SMG1Q96Q15 3661 aaKnown RBP12.75□□□□□ -0.37
SEC61A1-206ENST00000491668 RP1P56715 2156 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 SHROOM3Q8TF72 1996 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 ADAMTS20P59510 1910 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 MGAQ8IWI9 3026 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 CFAP69A5D8W1 941 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 A8MX80 341 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 MFSD11O43934 449 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 OPA1O60313 960 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 RECQL5O94762 991 aaPredicted RBP12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 ZRANB2O95218 330 aaKnown RBP eCLIP12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 TSHRP16473 764 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 MAXP61244 160 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 BCL2L1Q07817 233 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 TRAF2Q12933 501 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 RTP5Q14D33 572 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 PDK2Q15119 407 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 PRRT3Q5FWE3 981 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 ZCCHC8Q6NZY4 707 aaKnown RBP12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 ERAP2Q6P179 960 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 GUSBP11Q6P575 273 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 C19orf48Q6RUI8 117 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 DPPA4Q7L190 304 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 NT5DC3Q86UY8 548 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 CBARPQ8N350 705 aaPredicted RBP12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 PQLC3Q8N755 202 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 LRRN4Q8WUT4 740 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 UBE2Q2Q8WVN8 375 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 TSACCQ96A04 125 aaPredicted RBP12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 SMIM14Q96QK8 99 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 NUDCD1Q96RS6 583 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 MGME1Q9BQP7 344 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 APOOQ9BUR5 198 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 BOCQ9BWV1 1114 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 C1QTNF7Q9BXJ2 289 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 MAK16Q9BXY0 300 aaKnown RBP12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 RCOR3Q9P2K3 495 aaPredicted RBP12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 APOBEC3BQ9UH17 382 aaKnown RBP12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 CLCA2Q9UQC9 943 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 PCDHB1Q9Y5F3 818 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 KALRNO60229 2985 aa12.74□□□□□ -0.37
SEC61A1-206ENST00000491668 LMO7DNF2Z398 122 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 H3BM21 787 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 TOR1BO14657 336 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 TPP1O14773 563 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 YY2O15391 372 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 MT-CO3P00414 261 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 GP1BAP07359 652 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 ALPPL2P10696 532 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 LHCGRP22888 699 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 CTNNA2P26232 953 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 CTNNA1P35221 906 aaKnown RBP12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 DEKP35659 375 aaKnown RBP12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 HNF1BP35680 557 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 PEX5P50542 639 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 RENBPP51606 427 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 RWDD2BP57060 319 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 GNG11P61952 73 aa12.73□□□□□ -0.37
SEC61A1-206ENST00000491668 E2F1Q01094 437 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms