RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 PGAM1P18669 254 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 XPAP23025 273 aaPredicted RBP21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 DRD3P35462 400 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 MAGEA9P43362 315 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 NEK3P51956 506 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 KYNUQ16719 465 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 UBAP2Q5T6F2 1119 aaKnown RBP21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 ARMC3Q5W041 872 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 FBXL19Q6PCT2 694 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 ERN2Q76MJ5 926 aaKnown RBP21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 TRMT10CQ7L0Y3 403 aaKnown RBP21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 MRGPRX1Q96LB2 322 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 ZNF778Q96MU6 729 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 TTC25Q96NG3 672 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 SRPK1Q96SB4 655 aaKnown RBP21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 HDAC8Q9BY41 377 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 TRABDQ9H4I3 376 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 MRM3Q9HC36 420 aaKnown RBP21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 PCDH12Q9NPG4 1184 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 SPATA6Q9NWH7 488 aaPredicted RBP21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 ZNF711Q9Y462 761 aa21.8■■□□□ 1.08
VCPKMT-204ENST00000491402 A0A0U1RQS6 177 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 FAM237BA0A1B0GVD1 139 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 CCDC78A2IDD5 438 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 MROH6A6NGR9 719 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 TTC4O95801 387 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 NFKBIAP25963 317 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 P2RY2P41231 377 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 DGKEP52429 567 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 TAF1AQ15573 450 aaPredicted RBP21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 LYSMD3Q7Z3D4 306 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 TMEM135Q86UB9 458 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 PALM2Q8IXS6 379 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 MREGQ8N565 214 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 MFSD3Q96ES6 412 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 CFAP36Q96G28 342 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 PLAC1Q9HBJ0 212 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 B4GALT6Q9UBX8 382 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 RPS6KL1Q9Y6S9 549 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 SCN8AQ9UQD0 1980 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 C1orf232A0A0U1RR37 186 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 USP1O94782 785 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 ACSL3O95573 720 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 CRTAMO95727 393 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 SLC4A1P02730 911 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 NDUFV2P19404 249 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 SSTR1P30872 391 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 FAM193AP78312 1265 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 SEMG2Q02383 582 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 CNTN1Q12860 1018 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 LAMB3Q13751 1172 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 CES3Q6UWW8 571 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 UNC5AQ6ZN44 842 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 CAPN12Q6ZSI9 719 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 TSPAN33Q86UF1 283 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 ANKRD7Q92527 254 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 SIPA1Q96FS4 1042 aa21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 PABPC3Q9H361 631 aaKnown RBP21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 POLMQ9NP87 494 aaPredicted RBP21.79■■□□□ 1.08
VCPKMT-204ENST00000491402 A8MX80 341 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 RIPK2O43353 540 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 DNTTP04053 509 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 POLBP06746 335 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 LHCGRP22888 699 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 NMBRP28336 390 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 CXCL12P48061 93 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 GPX6P59796 221 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 ZBTB16Q05516 673 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 UAP1Q16222 522 aaPredicted RBP21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 CDKN3Q16667 212 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 PIP5KL1Q5T9C9 394 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 ERAP2Q6P179 960 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 DTWD2Q8NBA8 298 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 UBLCP1Q8WVY7 318 aaPredicted RBP21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 EPB41L4BQ9H329 900 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 ZFYVE1Q9HBF4 777 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 SERGEFQ9UGK8 458 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 SCML1Q9UN30 329 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 KCTD3Q9Y597 815 aa21.78■■□□□ 1.08
VCPKMT-204ENST00000491402 A0A1W2PP55 124 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 C2orf81A6NN90 581 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 DYNC1I1O14576 645 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 SPINT1O43278 529 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 BUD23O43709 281 aaKnown RBP21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 CYP2A6P11509 494 aaPredicted RBP21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 GABRG2P18507 467 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 HSD17B3P37058 310 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 MMP12P39900 470 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 SUOXP51687 545 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 CRYMQ14894 314 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 ANKRD20A4Q4UJ75 823 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 TSTD2Q5T7W7 516 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 AGBL4Q5VU57 503 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 STEAP4Q687X5 459 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 LRRC66Q68CR7 880 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 CRTC1Q6UUV9 634 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 C3orf62Q6ZUJ4 267 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 NLRP9Q7RTR0 991 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 TTC30BQ8N4P2 665 aa21.77■■□□□ 1.08
VCPKMT-204ENST00000491402 HDDC3Q8N4P3 179 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms