RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 IFI44Q8TCB0 444 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 MAML1Q92585 1016 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 HSPH1Q92598 858 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 FGF11Q92914 225 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 NAT6Q93015 286 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 TSACCQ96A04 125 aaPredicted RBP9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 SCRN2Q96FV2 425 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 HIC2Q96JB3 615 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 DEPDC7Q96QD5 511 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 XPO4Q9C0E2 1151 aaKnown RBP9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 UVRAGQ9P2Y5 699 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 PHTF1Q9UMS5 762 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 OR1A2Q9Y585 309 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 PCDHB1Q9Y5F3 818 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 COL27A1Q8IZC6 1860 aaPredicted RBP9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 NBEAQ8NFP9 2946 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 CELSR3Q9NYQ7 3312 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 TTC24A2A3L6 582 aaPredicted RBP9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 TMEM202A6NGA9 273 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 NTN3O00634 580 aaPredicted RBP9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 BRINP1O60477 761 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 TCEA3O75764 348 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 HEXIM1O94992 359 aaKnown RBP9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 PGLSO95336 258 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 ANXA6P08133 673 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 CELA2BP08218 269 aaPredicted RBP9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 ALPIP09923 528 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 HTR1BP28222 390 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 TEAD1P28347 426 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 MAN1A1P33908 653 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 SERPINB6P35237 376 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 GARSP41250 739 aaKnown RBP9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 RPIAP49247 311 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 TAS2R40P59535 323 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 SRP54P61011 504 aaKnown RBP9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 SEMG2Q02383 582 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 TRAF2Q12933 501 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 MMRN1Q13201 1228 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 DPYSL3Q14195 570 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 PDK2Q15119 407 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 TCEAL1Q15170 157 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 CDKN3Q16667 212 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 TBC1D25Q3MII6 688 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 ATP13A4Q4VNC1 1196 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 PERM1Q5SV97 790 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 CFAP58Q5T655 872 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 MARC1Q5VT66 337 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 PNCKQ6P2M8 343 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 EFL1Q7Z2Z2 1120 aaKnown RBP9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 TECPR1Q7Z6L1 1165 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 NLRP8Q86W28 1048 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 CPNE8Q86YQ8 564 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 PELI3Q8N2H9 469 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 PQLC3Q8N755 202 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 ATL2Q8NHH9 583 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 WDR48Q8TAF3 677 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 HNRNPLLQ8WVV9 542 aaKnown RBP9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 PIH1D2Q8WWB5 315 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 PRR11Q96HE9 360 aaPredicted RBP9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 WDR92Q96MX6 357 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 ZNF670Q9BS34 389 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 TEX101Q9BY14 249 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 KRTAP3-3Q9BYR6 98 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 KRTAP3-2Q9BYR7 98 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 KCTD5Q9NXV2 234 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 B4GALT6Q9UBX8 382 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 AMACRQ9UHK6 382 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 LCMT1Q9UIC8 334 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 PADI4Q9UM07 663 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 PCDHGC4Q9Y5F7 938 aa9.75□□□□□ -0.85
TMEM39A-210ENST00000490099 LAMA5O15230 3695 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 CPED1A4D0V7 1026 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 ZNF487B1APH4 448 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 PSMD11O00231 422 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 CSO75390 466 aaKnown RBP9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 MTA2O94776 668 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 PRLP01236 227 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 FUCA1P04066 466 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 H2AFZP0C0S5 128 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 ELFN1P0C7U0 828 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 LHCGRP22888 699 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 CES1P23141 567 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 CCNCP24863 283 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 ACTN2P35609 894 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 MMP13P45452 471 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 ERVPABLB-1P60509 514 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 SKOR1P84550 965 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 DPTQ07507 201 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 SLC10A2Q12908 348 aaPredicted RBP9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 ZNF235Q14590 738 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 ELOCQ15369 112 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 CNGA3Q16281 694 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 HADHQ16836 314 aaKnown RBP9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 SOWAHCQ53LP3 525 aaPredicted RBP9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 ANKRD20A8PQ5CZ79 823 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 NCBP2-AS2Q69YL0 99 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 SPECC1LQ69YQ0 1117 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 ENPP7Q6UWV6 458 aa9.74□□□□□ -0.85
TMEM39A-210ENST00000490099 H2AFVQ71UI9 128 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms