RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CLDN11O75508 207 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 LGALS2P05162 132 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 CD86P42081 329 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 IFI35P80217 286 aaPredicted RBP8.87□□□□□ -0.99
LSAMP-205ENST00000490035 ZNF540Q8NDQ6 660 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 VMP1Q96GC9 406 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 BTN2A3PQ96KV6 586 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 ULBP1Q9BZM6 244 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 DNAJC28Q9NX36 388 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 MTRRQ9UBK8 725 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 SPATA31C2B4DYI2 1134 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 PTDSS1P48651 473 aaKnown RBP8.87□□□□□ -0.99
LSAMP-205ENST00000490035 GALNT3Q14435 633 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 ATP13A5Q4VNC0 1218 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 SLC30A10Q6XR72 485 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 VN1R5Q7Z5H4 357 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 ARMC8Q8IUR7 673 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 OR8D1Q8WZ84 308 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 FCGR1BQ92637 280 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 OMA1Q96E52 524 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 EHD3Q9NZN3 535 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 FSCN2O14926 492 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 TFEBP19484 476 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 FAM180AQ6UWF9 173 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 C2orf15Q8WU43 125 aaKnown RBP8.87□□□□□ -0.99
LSAMP-205ENST00000490035 PDCD10Q9BUL8 212 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 FNDC11Q9BVV2 318 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 ALG9Q9H6U8 611 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 IL1RAPQ9NPH3 570 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 KPNA3O00505 521 aaPredicted RBP8.87□□□□□ -0.99
LSAMP-205ENST00000490035 MAP3K6O95382 1288 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 LCA5LO95447 670 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 MRPS5P82675 430 aaKnown RBP8.87□□□□□ -0.99
LSAMP-205ENST00000490035 ELP6Q0PNE2 266 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 SVOPLQ8N434 492 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 TMEM161BQ8NDZ6 487 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 SLC22A17Q8WUG5 538 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 MAGEE1Q9HCI5 957 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 EIF2B3Q9NR50 452 aaKnown RBP8.87□□□□□ -0.99
LSAMP-205ENST00000490035 BCL9LQ86UU0 1499 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 CACNB4O00305 520 aaPredicted RBP8.87□□□□□ -0.99
LSAMP-205ENST00000490035 WNT10BO00744 389 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 ASLP04424 464 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 DNAJB1P25685 340 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 PSMA1P25786 263 aaKnown RBP8.87□□□□□ -0.99
LSAMP-205ENST00000490035 GSTT1P30711 240 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 GPR1P46091 355 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 MPP5Q8N3R9 675 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 PIK3R5Q8WYR1 880 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 KAZALD1Q96I82 304 aa8.87□□□□□ -0.99
LSAMP-205ENST00000490035 FARP2O94887 1054 aaPredicted RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 SERPINA1P01009 418 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 CBX5P45973 191 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 HADHBP55084 474 aaKnown RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 CATSPERGQ6ZRH7 1159 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 TDRPQ86YL5 185 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 SPPL2BQ8TCT7 592 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 PRICKLE1Q96MT3 831 aaPredicted RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 RHOBTB2Q9BYZ6 727 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 NR2E3Q9Y5X4 410 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 KHDRBS3O75525 346 aaKnown RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 NOMO2Q5JPE7 1267 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 FAM183BPQ6ZVS7 135 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 PANX1Q96RD7 426 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 AIF1LQ9BQI0 150 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 CDH19Q9H159 772 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 ST6GALNAC4Q9H4F1 302 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 FKBP14Q9NWM8 211 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 PCDHGC3Q9UN70 934 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 PSMD13Q9UNM6 376 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 MYO18AQ92614 2054 aaKnown RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 MDM4O15151 490 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 HLA-DQA2P01906 255 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 LYNP07948 512 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 BNIPLQ7Z465 357 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 MINDY2Q8NBR6 621 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 CXorf40BQ96DE9 158 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 TMEM109Q9BVC6 243 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 ATXN10Q9UBB4 475 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 CYP7B1O75881 506 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 AP1S2P56377 157 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 MBTD1Q05BQ5 628 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 ATP1A4Q13733 1029 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 BEND5Q7L4P6 421 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 CELF6Q96J87 481 aaKnown RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 BTBD9Q96Q07 612 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 ZCWPW1Q9H0M4 648 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 KCNN2Q9H2S1 579 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 UPB1Q9UBR1 384 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 SAMHD1Q9Y3Z3 626 aaKnown RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 ADAMDEC1O15204 470 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 CALCAP01258 141 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 TAS2R41P59536 307 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 ORC1Q13415 861 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 HKDC1Q2TB90 917 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 PAN2Q504Q3 1202 aaKnown RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 GPAT3Q53EU6 434 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 XKR6Q5GH73 641 aa8.86□□□□□ -0.99
LSAMP-205ENST00000490035 SWT1Q5T5J6 900 aaKnown RBP8.86□□□□□ -0.99
LSAMP-205ENST00000490035 PTGR2Q8N8N7 351 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms