RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 CA4P22748 312 aa17.88■□□□□ 0.45
ABCF3-217ENST00000489719 KELP23276 732 aa17.88■□□□□ 0.45
ABCF3-217ENST00000489719 HK3P52790 923 aa17.88■□□□□ 0.45
ABCF3-217ENST00000489719 EPHB1P54762 984 aa17.88■□□□□ 0.45
ABCF3-217ENST00000489719 SRP54P61011 504 aaKnown RBP17.88■□□□□ 0.45
ABCF3-217ENST00000489719 ELOCQ15369 112 aa17.88■□□□□ 0.45
ABCF3-217ENST00000489719 DEFB133Q30KQ1 61 aa17.88■□□□□ 0.45
ABCF3-217ENST00000489719 HES3Q5TGS1 186 aa17.88■□□□□ 0.45
ABCF3-217ENST00000489719 USP45Q70EL2 814 aa17.88■□□□□ 0.45
ABCF3-217ENST00000489719 RFX6Q8HWS3 928 aa17.88■□□□□ 0.45
ABCF3-217ENST00000489719 FSTL5Q8N475 847 aaPredicted RBP17.88■□□□□ 0.45
ABCF3-217ENST00000489719 PLA2G15Q8NCC3 412 aa17.88■□□□□ 0.45
ABCF3-217ENST00000489719 LRRN4Q8WUT4 740 aa17.88■□□□□ 0.45
ABCF3-217ENST00000489719 HDAC11Q96DB2 347 aa17.88■□□□□ 0.45
ABCF3-217ENST00000489719 WDR92Q96MX6 357 aa17.88■□□□□ 0.45
ABCF3-217ENST00000489719 KLQ9UEF7 1012 aa17.88■□□□□ 0.45
ABCF3-217ENST00000489719 HYOU1Q9Y4L1 999 aa17.88■□□□□ 0.45
ABCF3-217ENST00000489719 LMO7DNF2Z398 122 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 PDE2AO00408 941 aaPredicted RBP17.87■□□□□ 0.45
ABCF3-217ENST00000489719 GCATO75600 419 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 HEXIM1O94992 359 aaKnown RBP17.87■□□□□ 0.45
ABCF3-217ENST00000489719 HOXC4P09017 264 aaPredicted RBP17.87■□□□□ 0.45
ABCF3-217ENST00000489719 ALPIP09923 528 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 MYF5P13349 255 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 TSHRP16473 764 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 CTPS1P17812 591 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 RPIAP49247 311 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 DSC2Q02487 901 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 TARDBPQ13148 414 aaKnown RBP eCLIP17.87■□□□□ 0.45
ABCF3-217ENST00000489719 PDK1Q15118 436 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 ALG11Q2TAA5 492 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 PNCKQ6P2M8 343 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 PIH1D2Q8WWB5 315 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 COQ10AQ96MF6 247 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 PANX2Q96RD6 677 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 LGMNQ99538 433 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 PPIL1Q9Y3C6 166 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 ALG6Q9Y672 507 aa17.87■□□□□ 0.45
ABCF3-217ENST00000489719 CPED1A4D0V7 1026 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 C3orf70A6NLC5 250 aaPredicted RBP17.86■□□□□ 0.45
ABCF3-217ENST00000489719 YY2O15391 372 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 KRT37O76014 449 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 IPO7O95373 1038 aaKnown RBP17.86■□□□□ 0.45
ABCF3-217ENST00000489719 LCA5LO95447 670 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 PDHA1P08559 390 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 TRIM23P36406 574 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 CLDN6P56747 220 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 AP1B1Q10567 949 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 NR0B2Q15466 257 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 CNGA3Q16281 694 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 SLC9A4Q6AI14 798 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 ESRP1Q6NXG1 681 aaKnown RBP17.86■□□□□ 0.45
ABCF3-217ENST00000489719 BZW1Q7L1Q6 419 aaKnown RBP17.86■□□□□ 0.45
ABCF3-217ENST00000489719 TMTC1Q8IUR5 882 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 SDR16C5Q8N3Y7 309 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 PLD5Q8N7P1 536 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 FUBP1Q96AE4 644 aaKnown RBP17.86■□□□□ 0.45
ABCF3-217ENST00000489719 NUS1Q96E22 293 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 LRRC61Q9BV99 259 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 PNMA8BQ9ULN7 279 aaPredicted RBP17.86■□□□□ 0.45
ABCF3-217ENST00000489719 CLCA2Q9UQC9 943 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 CHKBQ9Y259 395 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 EPN1Q9Y6I3 576 aaPredicted RBP17.86■□□□□ 0.45
ABCF3-217ENST00000489719 EPG5Q9HCE0 2579 aa17.86■□□□□ 0.45
ABCF3-217ENST00000489719 KCNK1O00180 336 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 PSMD11O00231 422 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 TNFRSF10CO14798 259 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 PPP1R12AO14974 1030 aaPredicted RBP17.85■□□□□ 0.45
ABCF3-217ENST00000489719 OPA1O60313 960 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 FZD6O60353 706 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 MT-CO3P00414 261 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 GP1BAP07359 652 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 COL5A1P20908 1838 aaPredicted RBP17.85■□□□□ 0.45
ABCF3-217ENST00000489719 HADHBP55084 474 aaKnown RBP17.85■□□□□ 0.45
ABCF3-217ENST00000489719 KIAA1024LP59773 190 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 INSM1Q01101 510 aaPredicted RBP17.85■□□□□ 0.45
ABCF3-217ENST00000489719 CYP4F3Q08477 520 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 PPIDQ08752 370 aaKnown RBP17.85■□□□□ 0.45
ABCF3-217ENST00000489719 CAMK2BQ13554 666 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 TFDP2Q14188 446 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 CDKN3Q16667 212 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 ALG1LQ6GMV1 187 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 LVRNQ6Q4G3 990 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 MFSD7Q6UXD7 560 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 HSD11B1LQ7Z5J1 315 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 GKN2Q86XP6 184 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 CACTIN-AS1Q8N1I8 211 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 CBARPQ8N350 705 aaPredicted RBP17.85■□□□□ 0.45
ABCF3-217ENST00000489719 OR56A4Q8NGH8 313 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 ARRDC2Q8TBH0 407 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 MDM1Q8TC05 714 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 IFI44Q8TCB0 444 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 CLPBQ9H078 707 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 BRD8Q9H0E9 1235 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 WDR26Q9H7D7 661 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 GULP1Q9UBP9 304 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 MOSPD1Q9UJG1 213 aa17.85■□□□□ 0.45
ABCF3-217ENST00000489719 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.85■□□□□ 0.45
ABCF3-217ENST00000489719 GOLGA6CA6NDK9 693 aa17.84■□□□□ 0.45
ABCF3-217ENST00000489719 GOLGA6BA6NDN3 693 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms