RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 NEDD9Q14511 834 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 ZRSR2Q15696 482 aaKnown RBP3.69□□□□□ -1.82
RFC4-213ENST00000489028 BAK1Q16611 211 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 TCTN1Q2MV58 587 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 KRTAP24-1Q3LI83 254 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 ATP13A5Q4VNC0 1218 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 LINGO2Q7L985 606 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 ZNF329Q86UD4 541 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 HEATR4Q86WZ0 1026 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 ZCCHC9Q8N567 271 aaKnown RBP3.69□□□□□ -1.82
RFC4-213ENST00000489028 ZBTB2Q8N680 514 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 SCCPDHQ8NBX0 429 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 BEST2Q8NFU1 509 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 HUS1BQ8NHY5 278 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 ST8SIA4Q92187 359 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 TANKQ92844 425 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 RNF125Q96EQ8 232 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 ZNF570Q96NI8 536 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 ZNF385AQ96PM9 386 aaKnown RBP3.69□□□□□ -1.82
RFC4-213ENST00000489028 AGXT2Q9BYV1 514 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 SLC25A18Q9H1K4 315 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 CNGB3Q9NQW8 809 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 SIX4Q9UIU6 781 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 ZNF112Q9UJU3 913 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 KCNS2Q9ULS6 477 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 A4GNTQ9UNA3 340 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 SCINQ9Y6U3 715 aa3.69□□□□□ -1.82
RFC4-213ENST00000489028 TMEM202A6NGA9 273 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 HNRNPCL2B2RXH8 293 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 SNAP23O00161 211 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 TNFSF14O43557 240 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 CAMTA2O94983 1202 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 F9P00740 461 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 F7P08709 466 aaPredicted RBP3.68□□□□□ -1.82
RFC4-213ENST00000489028 STX2P32856 288 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 KRTAP10-6P60371 365 aaPredicted RBP3.68□□□□□ -1.82
RFC4-213ENST00000489028 PTP4A2Q12974 167 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 TNFAIP1Q13829 316 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 ZRSR1Q15695 479 aaKnown RBP3.68□□□□□ -1.82
RFC4-213ENST00000489028 HIST2H2ACQ16777 129 aaPredicted RBP3.68□□□□□ -1.82
RFC4-213ENST00000489028 ALG11Q2TAA5 492 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 C9orf50Q5SZB4 431 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 FAM69AQ5T7M9 428 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 CPLX2Q6PUV4 134 aaKnown RBP3.68□□□□□ -1.82
RFC4-213ENST00000489028 USP43Q70EL4 1123 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 RRM2BQ7LG56 351 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 SMIM29Q86T20 159 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 CHERPQ8IWX8 916 aaKnown RBP3.68□□□□□ -1.82
RFC4-213ENST00000489028 NAGSQ8N159 534 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 MUC20Q8N307 709 aaPredicted RBP3.68□□□□□ -1.82
RFC4-213ENST00000489028 ESX1Q8N693 406 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 POC1AQ8NBT0 407 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 OR2AK2Q8NG84 335 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 NEK9Q8TD19 979 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 KLHL29Q96CT2 875 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 KIF1BPQ96EK5 621 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 EBF2Q9HAK2 575 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 C17orf75Q9HAS0 396 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 BPIFA1Q9NP55 256 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 WASH6PQ9NQA3 447 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 KCND2Q9NZV8 630 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 FBXO9Q9UK97 447 aaPredicted RBP3.68□□□□□ -1.82
RFC4-213ENST00000489028 RCOR1Q9UKL0 485 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 SARDHQ9UL12 918 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 CYP46A1Q9Y6A2 500 aa3.68□□□□□ -1.82
RFC4-213ENST00000489028 IGHV4OR15-8A0A075B7B6 117 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 RFPL2O75678 378 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 EIF3JO75822 258 aaKnown RBP3.67□□□□□ -1.82
RFC4-213ENST00000489028 FTCDO95954 541 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 UMODP07911 640 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 SRCP12931 536 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 CD58P19256 250 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 MAOAP21397 527 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 DDIT3P35638 169 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 NLRP5P59047 1200 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 SLC20A2Q08357 652 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 ARL16Q0P5N6 197 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 HYAL1Q12794 435 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 ZNF628Q5EBL2 1059 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 NAA35Q5VZE5 725 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 MEX3BQ6ZN04 569 aaKnown RBP3.67□□□□□ -1.82
RFC4-213ENST00000489028 ODF3L1Q8IXM7 274 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 KBTBD3Q8NAB2 608 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 SPATA3Q8NHX4 192 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 TMEM19Q96HH6 336 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 PSMD1Q99460 953 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 USP44Q9H0E7 712 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 CSTL1Q9H114 145 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 UBTD1Q9HAC8 227 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 MMP25Q9NPA2 562 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 PPP1R14DQ9NXH3 145 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 MPP6Q9NZW5 540 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 PDP2Q9P2J9 529 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 NAALADL1Q9UQQ1 740 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 CRYL1Q9Y2S2 319 aa3.67□□□□□ -1.82
RFC4-213ENST00000489028 ATXN2Q99700 1313 aaKnown RBP3.67□□□□□ -1.82
RFC4-213ENST00000489028 A0A0G2JPF8 293 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 HNRNPCL3B7ZW38 293 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 BMPR1BO00238 502 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 TSPAN4O14817 238 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms