RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 EEF1A1P68104 462 aaKnown RBP2.57□□□□□ -2
CCDC93-209ENST00000488908 MRPS5P82675 430 aaKnown RBP2.57□□□□□ -2
CCDC93-209ENST00000488908 RUNX2Q13950 521 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 ZFP69Q49AA0 526 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 SH2D4BQ5SQS7 431 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 EEF1A1P5Q5VTE0 462 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 RGMBQ6NW40 437 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 METTL7BQ6UX53 244 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 IL20RBQ6UXL0 311 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 DSELQ8IZU8 1212 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 AMER3Q8N944 861 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 GJC3Q8NFK1 279 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 DUSP19Q8WTR2 217 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 GDPD5Q8WTR4 605 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 HSPH1Q92598 858 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 STAMBPL1Q96FJ0 436 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 TMEM41AQ96HV5 264 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 POLR3CQ9BUI4 534 aaPredicted RBP2.57□□□□□ -2
CCDC93-209ENST00000488908 HERC2P3Q9BVR0 1158 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 CTDSP1Q9GZU7 261 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 OBP2BQ9NPH6 170 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 SLC52A3Q9NQ40 469 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 FAM120CQ9NX05 1096 aaKnown RBP2.57□□□□□ -2
CCDC93-209ENST00000488908 MAP3K20Q9NYL2 800 aaKnown RBP2.57□□□□□ -2
CCDC93-209ENST00000488908 TINAGQ9UJW2 476 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 NFE2L3Q9Y4A8 694 aa2.57□□□□□ -2
CCDC93-209ENST00000488908 A0A0U1RQF3 1178 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 GOLGA6L9A6NEM1 432 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 LGALS16A8MUM7 142 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 ZNF821O75541 412 aaPredicted RBP2.56□□□□□ -2
CCDC93-209ENST00000488908 CAVIN2O95810 425 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 PCNAP12004 261 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 TNNT1P13805 278 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 TRIM27P14373 513 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 ZNF26P17031 533 aaPredicted RBP2.56□□□□□ -2
CCDC93-209ENST00000488908 ITGAXP20702 1163 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 EFNA5P52803 228 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 PNLIPRP1P54315 467 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 ITGA9Q13797 1035 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 RRAGAQ7L523 313 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 SYT13Q7L8C5 426 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 RASGRP2Q7LDG7 609 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 PRSS45Q7RTY3 260 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 TRIM58Q8NG06 486 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 CSGALNACT1Q8TDX6 532 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 SNAPC3Q92966 411 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 SCRN2Q96FV2 425 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 POM121L2Q96KW2 1035 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 TRAPPC9Q96Q05 1148 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 VGLL1Q99990 258 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 RBM4BQ9BQ04 359 aaKnown RBP2.56□□□□□ -2
CCDC93-209ENST00000488908 TRIM51Q9BSJ1 452 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 SYT17Q9BSW7 474 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 TTC12Q9H892 705 aaPredicted RBP2.56□□□□□ -2
CCDC93-209ENST00000488908 C2CD2Q9Y426 696 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 ZNF318Q5VUA4 2279 aa2.56□□□□□ -2
CCDC93-209ENST00000488908 A0A0G2JLW4 131 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 HSPB2A8KAH6 182 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 KLRF2D3W0D1 207 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 H7C423 109 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 TCERG1O14776 1098 aaKnown RBP2.55□□□□□ -2
CCDC93-209ENST00000488908 FFAR2O15552 330 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 MYOD1P15172 320 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 CD72P21854 359 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 HNF1BP35680 557 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 MCM2P49736 904 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 TNFAIP2Q03169 654 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 ITGADQ13349 1161 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 HSPB2Q16082 182 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 XKR6Q5GH73 641 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 WDR38Q5JTN6 314 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 GPATCH4Q5T3I0 446 aaKnown RBP2.55□□□□□ -2
CCDC93-209ENST00000488908 FAM53AQ6NSI3 398 aaPredicted RBP2.55□□□□□ -2
CCDC93-209ENST00000488908 CCAR1Q8IX12 1150 aaKnown RBP2.55□□□□□ -2
CCDC93-209ENST00000488908 ADGRF5Q8IZF2 1346 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 SCCPDHQ8NBX0 429 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 AGBL3Q8NEM8 1001 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 ZNF473Q8WTR7 871 aaKnown RBP2.55□□□□□ -2
CCDC93-209ENST00000488908 KTI12Q96EK9 354 aaPredicted RBP2.55□□□□□ -2
CCDC93-209ENST00000488908 ZC3HAV1LQ96H79 300 aaKnown RBP2.55□□□□□ -2
CCDC93-209ENST00000488908 HAUS8Q9BT25 410 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 TFB2MQ9H5Q4 396 aaKnown RBP2.55□□□□□ -2
CCDC93-209ENST00000488908 TP53TG3Q9ULZ0 132 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 KLF2Q9Y5W3 355 aaPredicted RBP2.55□□□□□ -2
CCDC93-209ENST00000488908 ZHX2Q9Y6X8 837 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 A3GALT2U3KPV4 340 aa2.55□□□□□ -2
CCDC93-209ENST00000488908 IGLV5-45A0A087WSX0 123 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 SH2B2O14492 632 aaPredicted RBP2.54□□□□□ -2
CCDC93-209ENST00000488908 DCXO43602 365 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 SRSF10O75494 262 aaKnown RBP2.54□□□□□ -2
CCDC93-209ENST00000488908 IGHV4-39P01824 125 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 DNAH10OSP0CZ25 163 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 ERVK-10P10266 1014 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 GATA1P15976 413 aaPredicted RBP2.54□□□□□ -2
CCDC93-209ENST00000488908 PTPN2P17706 415 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 RRM1P23921 792 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 HOXA13P31271 388 aaPredicted RBP2.54□□□□□ -2
CCDC93-209ENST00000488908 HOXC8P31273 242 aa2.54□□□□□ -2
CCDC93-209ENST00000488908 RBM5P52756 815 aaKnown RBP eCLIP2.54□□□□□ -2
CCDC93-209ENST00000488908 AK2P54819 239 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms