RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ARID1BQ8NFD5 2236 aaPredicted RBP15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 A0A0J9YYE9 177 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 A0A0U1RQS6 177 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 GOLGA8CPA6NN73 597 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 ENC1O14682 589 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 PPP1R12AO14974 1030 aaPredicted RBP15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 SIGLEC6O43699 453 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 LDOC1O95751 146 aaPredicted RBP15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 TRBC1P01850 177 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 ALPIP09923 528 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 CYP2A6P11509 494 aaPredicted RBP15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 CTPS1P17812 591 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 CTNNA2P26232 953 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 HNF1BP35680 557 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 TRIM23P36406 574 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 THOP1P52888 689 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 NAP1L1P55209 391 aaKnown RBP15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 MTM1Q13496 603 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 PTK2BQ14289 1009 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 ACOX1Q15067 660 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 TEX44Q53QW1 395 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 MACC1Q6ZN28 852 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 NYAP1Q6ZVC0 841 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 BBS12Q6ZW61 710 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 BZW1Q7L1Q6 419 aaKnown RBP15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 HSD11B1LQ7Z5J1 315 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 KIAA1328Q86T90 577 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 NT5DC3Q86UY8 548 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 OR4C6Q8NH72 309 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 ALG3Q92685 438 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 FUBP1Q96AE4 644 aaKnown RBP15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 RBM41Q96IZ5 413 aaKnown RBP15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 CNDP2Q96KP4 475 aaKnown RBP15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 TMEM121BQ9BXQ6 578 aaPredicted RBP15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 CEP41Q9BYV8 373 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 TCEAL2Q9H3H9 227 aaPredicted RBP15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 HAUS2Q9NVX0 235 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 KLK13Q9UKR3 277 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 OR1A2Q9Y585 309 aa15.98■□□□□ 0.15
CTDSP1-209ENST00000488627 CCDC66A2RUB6 948 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 K7ESM1 405 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 SCAMP1O15126 338 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 NEBLO76041 1014 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 PCCBP05166 539 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 JUNDP17535 347 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 PTPN3P26045 913 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 CD86P42081 329 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 GSDMDP57764 484 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 COPS2P61201 443 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 RPL26P61254 145 aaKnown RBP15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 PTSQ03393 145 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 WASHC5Q12768 1159 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 KIF5AQ12840 1032 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 DNAJC3Q13217 504 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 CDKN3Q16667 212 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 KCTD16Q68DU8 428 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 CRTC1Q6UUV9 634 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 RFLNAQ6ZTI6 216 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 USP45Q70EL2 814 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 TECPR1Q7Z6L1 1165 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 RBFAQ8N0V3 343 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 ZNF548Q8NEK5 533 aaPredicted RBP15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 TFB1MQ8WVM0 346 aaKnown RBP15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 P3H4Q92791 437 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 IMP4Q96G21 291 aaKnown RBP15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 CNTNAP3BQ96NU0 1288 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 AGAP3Q96P47 875 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 TRIB3Q96RU7 358 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 HEMGNQ9BXL5 484 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 CNTNAP3Q9BZ76 1288 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 RPL26L1Q9UNX3 145 aaKnown RBP15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 EFR3BQ9Y2G0 817 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 ADGRG1Q9Y653 693 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 CSNK1G3Q9Y6M4 447 aa15.97■□□□□ 0.15
CTDSP1-209ENST00000488627 MACROD2A1Z1Q3 448 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 PSMD11O00231 422 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 GCATO75600 419 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 HOXC4P09017 264 aaPredicted RBP15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 CD68P34810 354 aaPredicted RBP15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 PTPN7P35236 360 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 ETV3P41162 512 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 ACADVLP49748 655 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 NFATC4Q14934 902 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 QPCTQ16769 361 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 ESRP1Q6NXG1 681 aaKnown RBP15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 PNCKQ6P2M8 343 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 Q6ZVL8 140 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 CCDC50Q8IVM0 306 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 PHACTR4Q8IZ21 702 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 DTD2Q96FN9 168 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 TEKT5Q96M29 485 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 TBATAQ96M53 351 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 LYSMD1Q96S90 227 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 LGR4Q9BXB1 951 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 CLPBQ9H078 707 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 SLC25A51Q9H1U9 297 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 PCDH9Q9HC56 1237 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 NLGN3Q9NZ94 848 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 SEPT10Q9P0V9 454 aa15.96■□□□□ 0.15
CTDSP1-209ENST00000488627 NEUROG3Q9Y4Z2 214 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms