RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 MLYCDO95822 493 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 LCATP04180 440 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 EIF2S1P05198 315 aaKnown RBP3.34□□□□□ -1.87
CD46-215ENST00000488596 LAMP2P13473 410 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 AGAP20933 346 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 GNLYP22749 145 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 PSMA4P25789 261 aaKnown RBP3.34□□□□□ -1.87
CD46-215ENST00000488596 CDAP32320 146 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 BSGP35613 385 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 MLH1P40692 756 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 ENTPD1P49961 510 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 ZP1P60852 638 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 ARF3P61204 181 aaPredicted RBP3.34□□□□□ -1.87
CD46-215ENST00000488596 ARF1P84077 181 aaKnown RBP3.34□□□□□ -1.87
CD46-215ENST00000488596 SORDQ00796 357 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 HNF4GQ14541 408 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 ASIC2Q16515 512 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 TCTN1Q2MV58 587 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 FNBP1LQ5T0N5 605 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 FAM205BPQ63HN1 556 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 ZNF324BQ6AW86 544 aaPredicted RBP3.34□□□□□ -1.87
CD46-215ENST00000488596 MZT2BQ6NZ67 158 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 KLHL24Q6TFL4 600 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 TRILQ7L0X0 811 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 SLC35F3Q8IY50 421 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 CCDC13Q8IYE1 715 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 ZBTB2Q8N680 514 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 FRMD1Q8N878 549 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 ZKSCAN4Q969J2 545 aaPredicted RBP3.34□□□□□ -1.87
CD46-215ENST00000488596 MMABQ96EY8 250 aaPredicted RBP3.34□□□□□ -1.87
CD46-215ENST00000488596 FAM84BQ96KN1 310 aaPredicted RBP3.34□□□□□ -1.87
CD46-215ENST00000488596 ZNF570Q96NI8 536 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 CLK4Q9HAZ1 481 aaKnown RBP3.34□□□□□ -1.87
CD46-215ENST00000488596 FBRSL1Q9HCM7 1045 aaKnown RBP3.34□□□□□ -1.87
CD46-215ENST00000488596 KRCC1Q9NPI7 259 aaPredicted RBP3.34□□□□□ -1.87
CD46-215ENST00000488596 TMEM51Q9NW97 253 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 CISD1Q9NZ45 108 aaKnown RBP3.34□□□□□ -1.87
CD46-215ENST00000488596 ADAM18Q9Y3Q7 739 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 PTGDR2Q9Y5Y4 395 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 CEPT1Q9Y6K0 416 aa3.34□□□□□ -1.87
CD46-215ENST00000488596 RSF1Q96T23 1441 aaPredicted RBP3.34□□□□□ -1.88
CD46-215ENST00000488596 A0A1W2PQF6 199 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 TTC36A6NLP5 189 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 BTBD18B2RXH4 712 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 TAF4O00268 1085 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 AP3D1O14617 1153 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 RGS14O43566 566 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 MTA2O94776 668 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 CCNDBP1O95273 360 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 ACADMP11310 421 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 NAGAP17050 411 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 MYF6P23409 242 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 TBXAS1P24557 533 aaPredicted RBP3.33□□□□□ -1.88
CD46-215ENST00000488596 CDC25AP30304 524 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 HOXA11P31270 313 aaPredicted RBP3.33□□□□□ -1.88
CD46-215ENST00000488596 HADHAP40939 763 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 GABRB2P47870 512 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 COMPP49747 757 aaPredicted RBP3.33□□□□□ -1.88
CD46-215ENST00000488596 PGGT1BP53609 377 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 F2RL1P55085 397 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 GPS2Q13227 327 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 CTTNQ14247 550 aaKnown RBP3.33□□□□□ -1.88
CD46-215ENST00000488596 DRAP1Q14919 205 aaPredicted RBP3.33□□□□□ -1.88
CD46-215ENST00000488596 DPCR1Q3MIW9 517 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 MMEL1Q495T6 779 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 FSCBQ5H9T9 825 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 ANKRD54Q6NXT1 300 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 QSOX2Q6ZRP7 698 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 GSTA5Q7RTV2 222 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 TTC39CQ8N584 583 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 WDTC1Q8N5D0 677 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 HUS1BQ8NHY5 278 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 CREB3L4Q8TEY5 395 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 OIT3Q8WWZ8 545 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 TRIB2Q92519 343 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 ARHGEF2Q92974 986 aaKnown RBP3.33□□□□□ -1.88
CD46-215ENST00000488596 FBXL8Q96CD0 374 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 MAP7D2Q96T17 732 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 RBM38Q9H0Z9 239 aaKnown RBP3.33□□□□□ -1.88
CD46-215ENST00000488596 TMX4Q9H1E5 349 aaPredicted RBP3.33□□□□□ -1.88
CD46-215ENST00000488596 GHITMQ9H3K2 345 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 MUC13Q9H3R2 512 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 CATSPERBQ9H7T0 1116 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 ASAH2Q9NR71 780 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 EHD2Q9NZN4 543 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 SLCO3A1Q9UIG8 710 aa3.33□□□□□ -1.88
CD46-215ENST00000488596 FBXO9Q9UK97 447 aaPredicted RBP3.33□□□□□ -1.88
CD46-215ENST00000488596 AAR2Q9Y312 384 aaKnown RBP3.33□□□□□ -1.88
CD46-215ENST00000488596 LAS1LQ9Y4W2 734 aaKnown RBP3.33□□□□□ -1.88
CD46-215ENST00000488596 SRPRBQ9Y5M8 271 aaKnown RBP3.33□□□□□ -1.88
CD46-215ENST00000488596 A0A1B0GVM2 712 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 LIPT2A6NK58 231 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 PTGES3LE9PB15 166 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 TIMM23O14925 209 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 NKX2-2O95096 273 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 MMP2P08253 660 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 G6PDP11413 515 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 PPARGP37231 505 aaPredicted RBP3.32□□□□□ -1.88
CD46-215ENST00000488596 CASP2P42575 452 aa3.32□□□□□ -1.88
CD46-215ENST00000488596 CLCN3P51790 818 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms