RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 PARP15Q460N3 678 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 C14orf28Q4W4Y0 310 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 ERAP2Q6P179 960 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 BRAT1Q6PJG6 821 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 TAF8Q7Z7C8 310 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 PELI3Q8N2H9 469 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 FAM46DQ8NEK8 389 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 OR56A4Q8NGH8 313 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 ATL2Q8NHH9 583 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 CCL4L1Q8NHW4 92 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 USP7Q93009 1102 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 TMEM159Q96B96 161 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 ZNF641Q96N77 438 aaPredicted RBP11.41□□□□□ -0.58
SNU13-208ENST00000488571 SEMA3CQ99985 751 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 NCAPGQ9BPX3 1015 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 ARHGAP9Q9BRR9 750 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 FUCA2Q9BTY2 467 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 LGR4Q9BXB1 951 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 TMEM168Q9H0V1 697 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 SEMA6CQ9H3T2 930 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 SAMSN1Q9NSI8 373 aaKnown RBP11.41□□□□□ -0.58
SNU13-208ENST00000488571 LRIT1Q9P2V4 623 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 UBA2Q9UBT2 640 aaPredicted RBP11.41□□□□□ -0.58
SNU13-208ENST00000488571 FZD10Q9ULW2 581 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 ATP8A1Q9Y2Q0 1164 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 SDK2Q58EX2 2172 aa11.41□□□□□ -0.58
SNU13-208ENST00000488571 A0A1W2PQC6 194 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 TCRBV5S1A1TA0A578 114 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 CFAP69A5D8W1 941 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 B4DGG1 531 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 EPHB6O15197 1021 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 CCP110O43303 1012 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 B4GAT1O43505 415 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 NUDT21O43809 227 aaKnown RBP11.4□□□□□ -0.58
SNU13-208ENST00000488571 CREB3O43889 395 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 PRAMEF11O60813 436 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 RECQL5O94762 991 aaPredicted RBP11.4□□□□□ -0.58
SNU13-208ENST00000488571 TRIM23P36406 574 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 KLK7P49862 253 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 MAPK10P53779 464 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 SRSF1Q07955 248 aaKnown RBP eCLIP11.4□□□□□ -0.58
SNU13-208ENST00000488571 GRM3Q14832 879 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 CLCA4Q14CN2 919 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 C16orf72Q14CZ0 275 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 TCP11X2Q5H9J9 407 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 EFHC2Q5JST6 749 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 MANEAQ5SRI9 462 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 SPECC1LQ69YQ0 1117 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 LIPIQ6XZB0 460 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 ATG14Q6ZNE5 492 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 C3orf20Q8ND61 904 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 NSMCE3Q96MG7 304 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 TUBGCP5Q96RT8 1024 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 CMKLR1Q99788 373 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 LRRC19Q9H756 370 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 RDH14Q9HBH5 336 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 SEPT10Q9P0V9 454 aa11.4□□□□□ -0.58
SNU13-208ENST00000488571 SIGLEC16A6NMB1 481 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.39□□□□□ -0.59
SNU13-208ENST00000488571 CACNB4O00305 520 aaPredicted RBP11.39□□□□□ -0.59
SNU13-208ENST00000488571 LCE2BO14633 110 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 TNFRSF10CO14798 259 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 HOXC4P09017 264 aaPredicted RBP11.39□□□□□ -0.59
SNU13-208ENST00000488571 CCL4P13236 92 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 ERCC5P28715 1186 aaPredicted RBP11.39□□□□□ -0.59
SNU13-208ENST00000488571 SOX5P35711 763 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 CSNK1DP48730 415 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 ARSDP51689 593 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 POLR2FP61218 127 aaKnown RBP11.39□□□□□ -0.59
SNU13-208ENST00000488571 UBE2HP62256 183 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 RPL7AP62424 266 aaKnown RBP11.39□□□□□ -0.59
SNU13-208ENST00000488571 ARHGEF7Q14155 803 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 PHF19Q5T6S3 580 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 TRIM72Q6ZMU5 477 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 ZNF574Q6ZN55 896 aaPredicted RBP11.39□□□□□ -0.59
SNU13-208ENST00000488571 MON1BQ7L1V2 547 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 ZNF438Q7Z4V0 828 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 C17orf82Q86X59 251 aaPredicted RBP11.39□□□□□ -0.59
SNU13-208ENST00000488571 NRROSQ86YC3 692 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 PHF13Q86YI8 300 aaPredicted RBP11.39□□□□□ -0.59
SNU13-208ENST00000488571 TSEN2Q8NCE0 465 aaKnown RBP11.39□□□□□ -0.59
SNU13-208ENST00000488571 PMEPA1Q969W9 287 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 ECHDC3Q96DC8 303 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 SELENOOQ9BVL4 669 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 B3GNT4Q9C0J1 378 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 DPEP2Q9H4A9 486 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 CATSPERBQ9H7T0 1116 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 CYP4F12Q9HCS2 524 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 SPATS2LQ9NUQ6 558 aaKnown RBP11.39□□□□□ -0.59
SNU13-208ENST00000488571 TAB2Q9NYJ8 693 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 ADAM22Q9P0K1 906 aa11.39□□□□□ -0.59
SNU13-208ENST00000488571 TRAFD1O14545 582 aaPredicted RBP11.38□□□□□ -0.59
SNU13-208ENST00000488571 FGF10O15520 208 aaPredicted RBP11.38□□□□□ -0.59
SNU13-208ENST00000488571 CPNE6O95741 557 aa11.38□□□□□ -0.59
SNU13-208ENST00000488571 FUCA1P04066 466 aa11.38□□□□□ -0.59
SNU13-208ENST00000488571 SFTPCP11686 197 aa11.38□□□□□ -0.59
SNU13-208ENST00000488571 CD82P27701 267 aa11.38□□□□□ -0.59
SNU13-208ENST00000488571 SERPINA4P29622 427 aa11.38□□□□□ -0.59
SNU13-208ENST00000488571 NSFP46459 744 aaKnown RBP11.38□□□□□ -0.59
SNU13-208ENST00000488571 ZNF143P52747 638 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms